RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 MINOS1-NBL1R4GNA1 71 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 FER1L5A0AVI2 2057 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 OR2H2O95918 312 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 GCGP01275 180 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 HIKESHIQ53FT3 197 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 OR1B1Q8NGR6 318 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 RABAC1Q9UI14 185 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 YLPM1P49750 1951 aaKnown RBP3.7□□□□□ -1.82
VPS13C-202ENST00000261517 OBSL1O75147 1896 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 PKIAP61925 76 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 PVRIGQ6DKI7 326 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 COLQQ9Y215 455 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-202ENST00000261517 ZFHX2Q9C0A1 2572 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-202ENST00000261517 MIXL1Q9H2W2 232 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 KIAA2026Q5HYC2 2103 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 AGFG2O95081 481 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 LRP11Q86VZ4 500 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 CXorf67Q86X51 503 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-202ENST00000261517 NUP37Q8NFH4 326 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 LPAR5Q9H1C0 372 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 RNF167Q9H6Y7 350 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 NCKAP5O14513 1909 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 GFRA3O60609 400 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 ADAP1O75689 374 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 C5orf17Q8NAS9 161 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 TMUB1Q9BVT8 246 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 WNT5BQ9H1J7 359 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 UBTD1Q9HAC8 227 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF257Q9Y2Q1 563 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 IGHV1-69-2A0A0G2JMI3 117 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 RHBDL1O75783 438 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 ATP5G2Q06055 141 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 RASL11AQ6T310 242 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 APCDD1LQ8NCL9 501 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 KLF14Q8TD94 323 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-202ENST00000261517 DNAJC4Q9NNZ3 241 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 DLL3Q9NYJ7 618 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 TRAV8-7A0A075B6U6 113 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 SRSF10O75494 262 aaKnown RBP3.7□□□□□ -1.82
VPS13C-202ENST00000261517 C8orf88P0DMB2 117 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 UCP1P25874 307 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 HNRNPA3P51991 378 aaKnown RBP3.7□□□□□ -1.82
VPS13C-202ENST00000261517 DLX6P56179 175 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 LYZP61626 148 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 LINC01590Q5TEZ4 76 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 ACP7Q6ZNF0 438 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 WDFY1Q8IWB7 410 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 ZIC4Q8N9L1 334 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 DOK5Q9P104 306 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 TINAGQ9UJW2 476 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 PQLC2LA1A4F0 135 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 TAS2R60P59551 318 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 MMDQ15546 238 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF383Q8NA42 475 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM208Q9BTX3 173 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 CBLN4Q9NTU7 201 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 DOCK9Q9BZ29 2069 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 FAM208BQ5VWN6 2430 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 SPG11Q96JI7 2443 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 NDUFS8O00217 210 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 SOCS1O15524 211 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 FMC1Q96HJ9 113 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 RAX2Q96IS3 184 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 RHOVQ96L33 236 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 TPPP3Q9BW30 176 aa3.7□□□□□ -1.82
VPS13C-202ENST00000261517 ING1Q9UK53 422 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-202ENST00000261517 LRRK1Q38SD2 2015 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 PHF3Q92576 2039 aaKnown RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 C1QTNF9BB2RNN3 333 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 SLC25A17O43808 307 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 DGAT2L7PQ6IED9 249 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 SLC7A5P1Q8MH63 180 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 SLC50A1Q9BRV3 221 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 SIRT4Q9Y6E7 314 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 LNP1A1A4G5 178 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 OR10J1P30954 320 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 TAF15Q92804 592 aaKnown RBP eCLIP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 UCN2Q96RP3 112 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 NEUROG3Q9Y4Z2 214 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 MNX1P50219 401 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 ACSF3Q4G176 576 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 CCL19Q99731 98 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 PARD6GQ9BYG4 376 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 DPM3Q9P2X0 92 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 KIAA1549LQ6ZVL6 1849 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 IGKV1D-42A0A075B6H8 117 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 KBTBD11-OT1A0A1B0GTJ5 212 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 MARCH11A6NNE9 402 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 NPIPB7O75200 414 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 EGR4Q05215 589 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 PSG5Q15238 335 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 C12orf54Q6X4T0 127 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 SMIM12Q96EX1 92 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 A0A1W2PQM1 296 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 PGLYRP1O75594 196 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 KBTBD11O94819 623 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 CIRBPQ14011 172 aaKnown RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 TEX45Q8NA69 505 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF385AQ96PM9 386 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms