RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 CIB3Q96Q77 187 aaPredicted RBP9.44□□□□□ -0.9
CLUHP3-201ENST00000254109 TMEM204Q9BSN7 226 aa9.44□□□□□ -0.9
CLUHP3-201ENST00000254109 ABHD14AQ9BUJ0 271 aa9.44□□□□□ -0.9
CLUHP3-201ENST00000254109 SCRT1Q9BWW7 348 aa9.44□□□□□ -0.9
CLUHP3-201ENST00000254109 SLC35B3Q9H1N7 401 aa9.44□□□□□ -0.9
CLUHP3-201ENST00000254109 RBFOX3A6NFN3 312 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 OR4A8P0C604 315 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 BRWD1-AS2P59051 145 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 CBLN2Q8IUK8 224 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 Q8TCH9 128 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 SFT2D1Q8WV19 159 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 SDSLQ96GA7 329 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 DIRC2Q96SL1 478 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 PSMG3Q9BT73 122 aaPredicted RBP9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 PARD6GQ9BYG4 376 aaPredicted RBP9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 CALYQ9NYX4 217 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 KIAA1456Q9P272 454 aa9.43□□□□□ -0.9
CLUHP3-201ENST00000254109 TRGV10A0A0A0MS01 117 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 LINC00473A8K010 186 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 VSTM5A8MXK1 200 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 H7C2Y5 167 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 CYB5R3P00387 301 aaPredicted RBP9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 HPRT1P00492 218 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 TNFRSF1AP19438 455 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 COL8A1P27658 744 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 DUTP33316 252 aaKnown RBP9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 RAB7AP51149 207 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 SLC38A11Q08AI6 406 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 ARL16Q0P5N6 197 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 ATP6V1FQ16864 119 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 LRRC75BQ2VPJ9 315 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 ZNF672Q499Z4 452 aaPredicted RBP9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 SP5Q6BEB4 398 aaPredicted RBP9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 SPSB3Q6PJ21 355 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 TMEM14EPQ6UXP3 125 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 DTD1Q8TEA8 209 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 R3HDM4Q96D70 268 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 FAM234AQ9H0X4 552 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 ZNF665Q9H7R5 613 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 UNKLQ9H9P5 680 aaKnown RBP9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 CISD1Q9NZ45 108 aaKnown RBP9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 UTP20O75691 2785 aaKnown RBP9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 LRRK2Q5S007 2527 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 TENM4Q6N022 2769 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 A6NNC1 897 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 M0R1X1 148 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 ITGB1BP1O14713 200 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 FCGR3BO75015 233 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 NFYBP25208 207 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 LOXL3P58215 753 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 SERF2P84101 59 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 AKIRIN2Q53H80 203 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 FAM201AQ5SY85 155 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 NCR3LG1Q68D85 454 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 STUMQ69YW2 141 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 OR8G2PQ6IF36 304 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 HAPLN4Q86UW8 402 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 RSG1Q9BU20 258 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 WDR61Q9GZS3 305 aaKnown RBP9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 HIPK2Q9H2X6 1198 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 SMCO4Q9NRQ5 59 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 CLN8Q9UBY8 286 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 PRELID3BQ9Y3B1 194 aa9.42□□□□□ -0.9
CLUHP3-201ENST00000254109 ARID1AO14497 2285 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 DOPEY2Q9Y3R5 2298 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 MARCH11A6NNE9 402 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 FAM90A9PA6NNJ1 464 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 CEBPZOSA8MTT3 80 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 M0R036 132 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 PPIHO43447 177 aaKnown RBP9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 SCAF4O95104 1147 aaKnown RBP9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 LY86O95711 162 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 KIR2DS2P43631 304 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 ERVK-16P61578 105 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 CCL20P78556 96 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 SOHLH1Q5JUK2 328 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 DEFB108BQ8NET1 73 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 OR10P1Q8NGE3 313 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 PINX1Q96BK5 328 aaKnown RBP9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 OR4C12Q96R67 309 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 S1PR3Q99500 378 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 RARRES2Q99969 163 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 SPOCK3Q9BQ16 436 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 GAB2Q9UQC2 676 aa9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 HRNRQ86YZ3 2850 aaPredicted RBP9.41□□□□□ -0.9
CLUHP3-201ENST00000254109 CHD3Q12873 2000 aaKnown RBP9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 TRAV1-1A0A0B4J248 108 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 UBE2L5PA0A1B0GUS4 154 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 NKX6-3A6NJ46 265 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 RBFOX2O43251 390 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 GYPAP02724 150 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 OR13C7P0DN81 318 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 CGB3P0DN86 165 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 CGB7P0DN87 165 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 APOBEC3AP31941 199 aaPredicted RBP9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 FAM122CQ6P4D5 195 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 TAF15Q92804 592 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 CLCC1Q96S66 551 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 CCL13Q99616 98 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms