RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CXorf66Q5JRM2 361 aaPredicted RBP11.58□□□□□ -0.55
SDF2-201ENST00000247020 ZNF525Q8N782 197 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 ZNF383Q8NA42 475 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 MARVELD3Q96A59 401 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 CLEC7AQ9BXN2 247 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 SLC25A31Q9H0C2 315 aa11.58□□□□□ -0.55
SDF2-201ENST00000247020 LYRM2Q9NU23 88 aaPredicted RBP11.58□□□□□ -0.55
SDF2-201ENST00000247020 AMMECR1Q9Y4X0 333 aaPredicted RBP11.58□□□□□ -0.55
SDF2-201ENST00000247020 MALRD1Q5VYJ5 2156 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 TXNL1O43396 289 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 SYNGR2O43760 224 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 ENSAO43768 121 aaKnown RBP11.58□□□□□ -0.56
SDF2-201ENST00000247020 HRASP01112 189 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 IGLV1-47P01700 117 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 APOA2P02652 100 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 CT45A6P0DMU7 189 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 CT45A5P0DMU8 189 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 CT45A7P0DMV0 189 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 BAXQ07812 192 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 HLA-DRB5Q30154 266 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 OR2C3Q8N628 320 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 OR13D1Q8NGV5 346 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 ST8SIA2Q92186 375 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 PIMREGQ9BSJ6 248 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 UNKLQ9H9P5 680 aaKnown RBP11.58□□□□□ -0.56
SDF2-201ENST00000247020 HSPB7Q9UBY9 170 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 WSB1Q9Y6I7 421 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 FLNCQ14315 2725 aa11.58□□□□□ -0.56
SDF2-201ENST00000247020 SSSCA1O60232 199 aa11.57□□□□□ -0.56
SDF2-201ENST00000247020 GAPDHP04406 335 aaKnown RBP11.57□□□□□ -0.56
SDF2-201ENST00000247020 LINC00205P59089 165 aa11.57□□□□□ -0.56
SDF2-201ENST00000247020 RPL23AP62750 156 aaKnown RBP11.57□□□□□ -0.56
SDF2-201ENST00000247020 OR5AN1Q8NGI8 311 aa11.57□□□□□ -0.56
SDF2-201ENST00000247020 SCARB1Q8WTV0 552 aa11.57□□□□□ -0.56
SDF2-201ENST00000247020 ZNF471Q9BX82 626 aaPredicted RBP11.57□□□□□ -0.56
SDF2-201ENST00000247020 BPESC1Q9GZL8 116 aa11.57□□□□□ -0.56
SDF2-201ENST00000247020 ZC4H2Q9NQZ6 224 aa11.57□□□□□ -0.56
SDF2-201ENST00000247020 SLC35D1Q9NTN3 355 aa11.57□□□□□ -0.56
SDF2-201ENST00000247020 KPTNQ9Y664 436 aa11.57□□□□□ -0.56
SDF2-201ENST00000247020 MYO18BQ8IUG5 2567 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 CHST1O43916 411 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 TPT1P13693 172 aaKnown RBP11.56□□□□□ -0.56
SDF2-201ENST00000247020 PRTN3P24158 256 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 DSCR9P59020 149 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 TNFRSF9Q07011 255 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 PDPNQ86YL7 162 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 Q8N7P7 452 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 OR52E5Q8NH55 327 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 OSR1Q8TAX0 266 aaPredicted RBP11.56□□□□□ -0.56
SDF2-201ENST00000247020 FAM168AQ92567 244 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 SMIM8Q96KF7 97 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 NARFLQ9H6Q4 476 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 ONECUT1Q9UBC0 465 aa11.56□□□□□ -0.56
SDF2-201ENST00000247020 POLR3KQ9Y2Y1 108 aaPredicted RBP11.56□□□□□ -0.56
SDF2-201ENST00000247020 KCNAB3O43448 404 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 CRYZL1O95825 349 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 CFDP00746 253 aaPredicted RBP11.55□□□□□ -0.56
SDF2-201ENST00000247020 MC5RP33032 325 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 RAB13P51153 203 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 LMO4P61968 165 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 PDLIM3Q53GG5 364 aaPredicted RBP11.55□□□□□ -0.56
SDF2-201ENST00000247020 TMEM177Q53S58 311 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 ZNF429Q86V71 674 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 TGIF2LXQ8IUE1 241 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 OR11H6Q8NGC7 330 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 CLDND2Q8NHS1 167 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 C10orf105Q8TEF2 133 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 CIB3Q96Q77 187 aaPredicted RBP11.55□□□□□ -0.56
SDF2-201ENST00000247020 NABP2Q9BQ15 211 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 GSX2Q9BZM3 304 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 MAGT1Q9H0U3 335 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 CYTL1Q9NRR1 136 aa11.55□□□□□ -0.56
SDF2-201ENST00000247020 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 H0YJW9 148 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 FOXH1O75593 365 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 JTBO76095 146 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 SPDEFO95238 335 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 PAX9P55771 341 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 ATP5J2P56134 94 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 UBE2KP61086 200 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 PAX2Q02962 417 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 IZUMO4Q1ZYL8 232 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 CLEC2AQ6UVW9 174 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 ZNF295-AS1Q8N0V1 137 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 RHOVQ96L33 236 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 MRPL20Q9BYC9 149 aaKnown RBP11.54□□□□□ -0.56
SDF2-201ENST00000247020 TMEM140Q9NV12 185 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 DCHS2Q6V1P9 2916 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 IGHV2-70DA0A0C4DH43 119 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 BUB1B-PAK6H3BSN5 160 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 J3QKU1 62 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 SCAF4O95104 1147 aaKnown RBP11.54□□□□□ -0.56
SDF2-201ENST00000247020 IL6RP08887 468 aaPredicted RBP11.54□□□□□ -0.56
SDF2-201ENST00000247020 PLA2G2AP14555 144 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 CAV2P51636 162 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 EWSR1Q01844 656 aaKnown RBP eCLIP11.54□□□□□ -0.56
SDF2-201ENST00000247020 CLLU1Q5K131 121 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 BAP18Q8IXM2 172 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 TMEM252Q8N6L7 170 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 OR4A16Q8NH70 328 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms