RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SSTP61278 116 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 PKIAP61925 76 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 LTC4SQ16873 150 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 CD177Q8N6Q3 437 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 C1orf162Q8NEQ5 155 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-202ENST00000244303 SARAFQ96BY9 339 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 MEGF10Q96KG7 1140 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 SMIM7Q9BQ49 75 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 CTXND1A0A1B0GTU2 59 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 MARCH11A6NNE9 402 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 IFNL4K9M1U5 179 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 GCH1P30793 250 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 TCF15Q12870 199 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 EDDM3AQ14507 147 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 ZNF718Q3SXZ3 478 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 FFAR4Q5NUL3 377 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 ZNF66Q6ZN08 573 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 TCTEX1D1Q8N7M0 179 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 OR10G9Q8NGN4 311 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 OR10G7Q8NGN6 311 aa11.99□□□□□ -0.49
HIF3A-202ENST00000244303 PACRGQ96M98 296 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-202ENST00000244303 MRPL37Q9BZE1 423 aaKnown RBP11.99□□□□□ -0.49
HIF3A-202ENST00000244303 A0A1B0GV90 55 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 SMCO3A2RU48 225 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 ZNF891A8MT65 544 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-202ENST00000244303 DDTP30046 118 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 ADIRFQ15847 76 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 GATAD1Q8WUU5 269 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 LRRC29Q8WV35 223 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 SNX22Q96L94 193 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 HSD17B10Q99714 261 aaKnown RBP11.98□□□□□ -0.49
HIF3A-202ENST00000244303 AGMATQ9BSE5 352 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 NPCDR1Q9BY65 106 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 NAT8Q9UHE5 227 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 A0A087X0M5 115 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 IGHV2OR16-5A0A0B4J2B6 119 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 IGHV1-18A0A0C4DH31 117 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 A0A1B0GX30 115 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 C15orf65H3BRN8 121 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 TGOLN2O43493 480 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 CEACAM4O75871 244 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 PSMB3P49720 205 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 NCR3LG1Q68D85 454 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 RPUSD4Q96CM3 377 aaKnown RBP11.98□□□□□ -0.49
HIF3A-202ENST00000244303 PLPPR2Q96GM1 343 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 CIB3Q96Q77 187 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-202ENST00000244303 LAMP3Q9UQV4 416 aa11.98□□□□□ -0.49
HIF3A-202ENST00000244303 PRR33A8MZF0 331 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 SPINT2O43291 252 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 IGLV1-44P01699 117 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 MBP02144 154 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 DEFA4P12838 97 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 CYP2G1PQ6ZSU1 146 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 QTRT1Q9BXR0 403 aaKnown RBP11.97□□□□□ -0.49
HIF3A-202ENST00000244303 CTDSP1Q9GZU7 261 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 TET2Q6N021 2002 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-202ENST00000244303 KBTBD11O94819 623 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 OPN1MWP04001 364 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 RNF224P0DH78 156 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 OPN1MW2P0DN77 364 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 OPN1MW3P0DN78 364 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 EGR1P18146 543 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 TMEM241Q24JQ0 296 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 VWC2Q2TAL6 325 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 MBNL2Q5VZF2 373 aaKnown RBP11.97□□□□□ -0.49
HIF3A-202ENST00000244303 REC114Q7Z4M0 266 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 R3HDM4Q96D70 268 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 ACTR3CQ9C0K3 210 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-202ENST00000244303 OPN3Q9H1Y3 402 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-202ENST00000244303 WASF3Q9UPY6 502 aa11.97□□□□□ -0.49
HIF3A-202ENST00000244303 SVILO95425 2214 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 ADH4P08319 380 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 OR9G9P0C7N8 305 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 MDKP21741 143 aaPredicted RBP11.96□□□□□ -0.49
HIF3A-202ENST00000244303 TUBG1P23258 451 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 PRDX2P32119 198 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 HTD2P86397 168 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 ZADH2Q8N4Q0 377 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 ZNF709Q8N972 641 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 OR2Z1Q8NG97 314 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 RAB24Q969Q5 203 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 PARLQ9H300 379 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 TUBG2Q9NRH3 451 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.49
HIF3A-202ENST00000244303 C15orf62A8K5M9 175 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 AHRRA9YTQ3 701 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 PROP1O75360 226 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 DUTP33316 252 aaKnown RBP11.95□□□□□ -0.5
HIF3A-202ENST00000244303 GPR12P47775 334 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 GNB2P62879 340 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 C16orf82Q7Z2V1 217 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 PRSS33Q8NF86 280 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 OR4F5Q8NH21 305 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 OR4F4Q96R69 305 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 HIST1H2BLQ99880 126 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 MANBALQ9NQG1 85 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 PITPNC1Q9UKF7 332 aa11.95□□□□□ -0.5
HIF3A-202ENST00000244303 CNOT1A5YKK6 2376 aaKnown RBP11.95□□□□□ -0.5
HIF3A-202ENST00000244303 IGKV1D-17A0A075B6S4 117 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms