RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 PIGBOS1A0A0B4J2F0 54 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 A0A1B0GV90 55 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 B4E171 279 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 HOXC12P31275 282 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 TSPAN7P41732 249 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 SOX8P57073 446 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 SLC10A1Q14973 349 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 RTP5Q14D33 572 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 SSX2Q16385 188 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 TMEM144Q7Z5S9 345 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 RAB24Q969Q5 203 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 EDDM3BP56851 147 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 RPL15P61313 204 aaKnown RBP10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 SSPNQ14714 243 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 FAM201AQ5SY85 155 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 SCGB1C1Q8TD33 95 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 GUCD1Q96NT3 240 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 C2orf88Q9BSF0 95 aa10.01□□□□□ -0.81
SEC61A1-201ENST00000243253 UBE2L5PA0A1B0GUS4 154 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 CEBPZOSA8MTT3 80 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 J3QT63 122 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 PRB4P10163 310 aaPredicted RBP10□□□□□ -0.81
SEC61A1-201ENST00000243253 COL8A2P25067 703 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 NUBP1P53384 320 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 GNB2P62879 340 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 MOB1BQ7L9L4 216 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 SCCPDHQ8NBX0 429 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 RPUSD4Q96CM3 377 aaKnown RBP10□□□□□ -0.81
SEC61A1-201ENST00000243253 WDYHV1Q96HA8 205 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 GPR87Q9BY21 358 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 A0A1W2PNU3 283 aaPredicted RBP10□□□□□ -0.81
SEC61A1-201ENST00000243253 ARR3P36575 388 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 HBG1P69891 147 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 HBG2P69892 147 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 SLC38A11Q08AI6 406 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 TMEM241Q24JQ0 296 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 TMEM249Q2WGJ8 235 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 C11orf53Q8IXP5 236 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 LIN7CQ9NUP9 197 aaKnown RBP10□□□□□ -0.81
SEC61A1-201ENST00000243253 PSPNO60542 156 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 EGR1P18146 543 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 OR3A1P47881 315 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 VKORC1L1Q8N0U8 176 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 ZNF645Q8N7E2 425 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 BCL2L2Q92843 193 aaPredicted RBP10□□□□□ -0.81
SEC61A1-201ENST00000243253 MEGF10Q96KG7 1140 aa10□□□□□ -0.81
SEC61A1-201ENST00000243253 CACNA1AO00555 2505 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 IGHV3OR15-7A0A075B7D8 119 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 LRRC30A6NM36 301 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 RNF224P0DH78 156 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 PRB3Q04118 309 aaPredicted RBP9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 TFF3Q07654 80 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 RNFT1Q5M7Z0 435 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 DEFB124Q8NES8 71 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 MISP3Q96FF7 219 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 C1orf159Q96HA4 380 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 NOTCH3Q9UM47 2321 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 PRSS46E5RG02 174 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 NDUFB7P17568 137 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 S100GP29377 79 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 UBE2G2P60604 165 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 BSXQ3C1V8 233 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 NCR3LG1Q68D85 454 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 FAM173AQ9BQD7 235 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 A0A087X0M5 115 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 A0A1B0GX30 115 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 ODAMA1E959 279 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 SLC31A2O15432 143 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 TIMM8AO60220 97 aaPredicted RBP9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 G6PCP35575 357 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 TAS2R60P59551 318 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 SSTP61278 116 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 SMIM7Q9BQ49 75 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 NPCDR1Q9BY65 106 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 SLC25A22Q9H936 323 aa9.99□□□□□ -0.81
SEC61A1-201ENST00000243253 CTXND1A0A1B0GTU2 59 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 HRASP01112 189 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 OR52L2PQ8NGH6 319 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 ACY3Q96HD9 319 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 PCGF1Q9BSM1 259 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 CREBBPQ92793 2442 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 TMPRSS2O15393 492 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 ADIRFQ15847 76 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 LHX4Q969G2 390 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 CLN8Q9UBY8 286 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 GAB2Q9UQC2 676 aa9.98□□□□□ -0.81
SEC61A1-201ENST00000243253 PROP1O75360 226 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 FAM3BP58499 235 aaPredicted RBP9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 MSMO1Q15800 293 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 BEND2Q8NDZ0 799 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 SLC25A40Q8TBP6 338 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 NINJ1Q92982 152 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 ZDHHC16Q969W1 377 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 WFIKKN1Q96NZ8 548 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 OR6C3Q9NZP0 311 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 HCFC1P51610 2035 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.97□□□□□ -0.811e-7■■■■□ 20.5
SEC61A1-201ENST00000243253 LRBAP50851 2863 aa9.97□□□□□ -0.81
SEC61A1-201ENST00000243253 TRGV5A0A0B4J1U4 118 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms