RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 NICN1Q9BSH3 213 aa6.22□□□□□ -1.41
IFT43-201ENST00000238628 TMEM59Q9BXS4 323 aa6.22□□□□□ -1.41
IFT43-201ENST00000238628 AKIP1Q9NQ31 210 aa6.22□□□□□ -1.41
IFT43-201ENST00000238628 ZC4H2Q9NQZ6 224 aa6.22□□□□□ -1.41
IFT43-201ENST00000238628 ZNF230Q9UIE0 474 aaPredicted RBP6.22□□□□□ -1.41
IFT43-201ENST00000238628 MGAT4AQ9UM21 535 aa6.22□□□□□ -1.41
IFT43-201ENST00000238628 EXOSC1Q9Y3B2 195 aaKnown RBP6.22□□□□□ -1.41
IFT43-201ENST00000238628 SELENOKQ9Y6D0 94 aa6.22□□□□□ -1.41
IFT43-201ENST00000238628 TRBV6-6A0A0A6YYG2 114 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 PNMA8CA0A1B0GUJ8 204 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 FAM223BA6NKX1 122 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 SRRM4A7MD48 611 aaKnown RBP6.21□□□□□ -1.42
IFT43-201ENST00000238628 PPP5D1E7EU14 171 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 GGCTO75223 188 aaKnown RBP6.21□□□□□ -1.42
IFT43-201ENST00000238628 WBP4O75554 376 aaKnown RBP6.21□□□□□ -1.42
IFT43-201ENST00000238628 CDK2AP2O75956 126 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 OR2C1O95371 312 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 RBMY1A1P0DJD3 496 aaKnown RBP6.21□□□□□ -1.42
IFT43-201ENST00000238628 CBLN1P23435 193 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
IFT43-201ENST00000238628 HLA-DRB3P79483 266 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 EWSR1Q01844 656 aaKnown RBP eCLIP6.21□□□□□ -1.42
IFT43-201ENST00000238628 TNFRSF9Q07011 255 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 TNXAQ16473 311 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 ANKRD55Q3KP44 614 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 TMEM177Q53S58 311 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 GLT8D1Q68CQ7 371 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 ZNF57Q68EA5 555 aaPredicted RBP6.21□□□□□ -1.42
IFT43-201ENST00000238628 LYG2Q86SG7 212 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 WFDC3Q8IUB2 231 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 FAM223AQ8IWN6 122 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 TEX45Q8NA69 505 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 KCNG3Q8TAE7 436 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 SRSF12Q8WXF0 261 aaKnown RBP6.21□□□□□ -1.42
IFT43-201ENST00000238628 HDHD3Q9BSH5 251 aaPredicted RBP6.21□□□□□ -1.42
IFT43-201ENST00000238628 C9orf16Q9BUW7 83 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 TM2D1Q9BX74 207 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 RDH8Q9NYR8 311 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 AK3Q9UIJ7 227 aa6.21□□□□□ -1.42
IFT43-201ENST00000238628 DIMT1Q9UNQ2 313 aaKnown RBP6.21□□□□□ -1.42
IFT43-201ENST00000238628 TRBV9A0A0B4J1U6 114 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 LGALS9O00182 355 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 SPRY2O43597 315 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 ATP5HO75947 161 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 OR2J3O76001 311 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 HLA-AP01891 365 aaKnown RBP6.2□□□□□ -1.42
IFT43-201ENST00000238628 CELP19835 753 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 MAPK3P27361 379 aaPredicted RBP6.2□□□□□ -1.42
IFT43-201ENST00000238628 BMI1P35226 326 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 TAS2R43P59537 309 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 TAGLNQ01995 201 aaKnown RBP6.2□□□□□ -1.42
IFT43-201ENST00000238628 ZNF45Q02386 682 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 PRSS8Q16651 343 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 MRGPRG-AS1Q2M3A8 158 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 VMA21Q3ZAQ7 101 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 FAM209BQ5JX69 171 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 GPHB5Q86YW7 130 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 TTC9CQ8N5M4 171 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.2□□□□□ -1.42
IFT43-201ENST00000238628 NECAP1Q8NC96 275 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 ZNF555Q8NEP9 628 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 PHLDA1Q8WV24 401 aaPredicted RBP6.2□□□□□ -1.42
IFT43-201ENST00000238628 ACOT12Q8WYK0 555 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 KCNK15Q9H427 330 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 Q9N2K0 584 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 SDHAF2Q9NX18 166 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 DMRT1Q9Y5R6 373 aa6.2□□□□□ -1.42
IFT43-201ENST00000238628 A0A0A6YYD4 124 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 IGKV1-6A0A0C4DH72 117 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 ZNF320A2RRD8 509 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 TRDCB7Z8K6 153 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 SOCS1O15524 211 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 ACTL6BO94805 426 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 SCAF4O95104 1147 aaKnown RBP6.19□□□□□ -1.42
IFT43-201ENST00000238628 CD1AP06126 327 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 RRASP10301 218 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 SRMP19623 302 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 MAP2K4P45985 399 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 UNC119Q13432 240 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 TPBGQ13641 420 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 RTL8BQ17RB0 113 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 C15orf32Q32M92 178 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 FAM106AQ4KMX7 169 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 TM4SF20Q53R12 229 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 C1orf100Q5SVJ3 147 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 TTC23Q5W5X9 447 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 IDO2Q6ZQW0 420 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 Q6ZWC4 215 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 TMEM61Q8N0U2 210 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 UXS1Q8NBZ7 420 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 ZNF485Q8NCK3 441 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 CACNG8Q8WXS5 425 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 GGHQ92820 318 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 CMSS1Q9BQ75 279 aaKnown RBP6.19□□□□□ -1.42
IFT43-201ENST00000238628 URM1Q9BTM9 101 aaKnown RBP6.19□□□□□ -1.42
IFT43-201ENST00000238628 OR2D2Q9H210 308 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 MLXQ9UH92 298 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 TP53TG1Q9Y2A0 90 aa6.19□□□□□ -1.42
IFT43-201ENST00000238628 TMEM14DPA8MWL7 114 aa6.18□□□□□ -1.42
IFT43-201ENST00000238628 RTL8CO15255 209 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms