RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 ASPDHA6ND91 283 aa6.41□□□□□ -1.38
MED28-201ENST00000237380 CBY3A6NI87 242 aa6.41□□□□□ -1.38
MED28-201ENST00000237380 WNT1P04628 370 aa6.41□□□□□ -1.38
MED28-201ENST00000237380 PMCHL1Q16048 86 aa6.41□□□□□ -1.38
MED28-201ENST00000237380 TP53RKQ96S44 253 aa6.41□□□□□ -1.38
MED28-201ENST00000237380 MSL2Q9HCI7 577 aa6.41□□□□□ -1.38
MED28-201ENST00000237380 MVDP53602 400 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 GAPTQ8N292 157 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 RNASEH2CQ8TDP1 164 aaKnown RBP6.4□□□□□ -1.38
MED28-201ENST00000237380 ITLN2Q8WWU7 325 aaPredicted RBP6.4□□□□□ -1.38
MED28-201ENST00000237380 GGACTQ9BVM4 153 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 RBKSQ9H477 322 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 ARID2Q68CP9 1835 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 ZNF236Q9UL36 1845 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 IGHV3OR15-7A0A075B7D8 119 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 SHISA8B8ZZ34 492 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 NKX2-8O15522 239 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 ZNF841Q6ZN19 808 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 ZNF502Q8TBZ5 544 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 TREM2Q9NZC2 230 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 SLC25A16P16260 332 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 TFPI2P48307 235 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 TIAL1Q01085 375 aaKnown RBP eCLIP6.4□□□□□ -1.388e-7■□□□□ 8.1
MED28-201ENST00000237380 C10orf111Q8N326 155 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 TMEM86BQ8N661 226 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 LPAR5Q9H1C0 372 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 TRGV11A0A075B6L2 103 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 ZFPL1O95159 310 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 FXYD3Q14802 87 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 ITLN1Q8WWA0 313 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 RPP25Q9BUL9 199 aaKnown RBP6.4□□□□□ -1.38
MED28-201ENST00000237380 HLA-DQA1P01909 254 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 PI3P19957 117 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 SLC25A53Q5H9E4 307 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 OR10AG1Q8NH19 301 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 SSMEM1Q8WWF3 244 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 TMEM106BQ9NUM4 274 aa6.4□□□□□ -1.38
MED28-201ENST00000237380 ISG15P05161 165 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 CD69Q07108 199 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 SLC25A37Q9NYZ2 338 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 OR5AC2Q9NZP5 309 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 SEMA5BQ9P283 1151 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 LINC01559Q495D7 138 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 ZNF318Q5VUA4 2279 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 MPC2O95563 127 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 WNT3P56703 355 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 LY6EQ16553 131 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 FOXB2Q5VYV0 432 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 LIMS2Q7Z4I7 341 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 PILRAQ9UKJ1 303 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 AHCTF1Q8WYP5 2266 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 PROB1E7EW31 1015 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 MOSP00540 346 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 TEX37Q96LM6 180 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 SBF2Q86WG5 1849 aa6.4□□□□□ -1.39
MED28-201ENST00000237380 J3KRW8 73 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 LINC00869P0C866 280 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 UNC119Q13432 240 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 BCDIN3DQ7Z5W3 292 aaKnown RBP6.39□□□□□ -1.39
MED28-201ENST00000237380 HIST1H2BAQ96A08 127 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 WDR89Q96FK6 387 aaPredicted RBP6.39□□□□□ -1.39
MED28-201ENST00000237380 LINC01587Q99440 93 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 SLC50A1Q9BRV3 221 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 SOX21Q9Y651 276 aaPredicted RBP6.39□□□□□ -1.39
MED28-201ENST00000237380 LOC390937A0A1W2PQ73 354 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 KBTBD11O94819 623 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 C1QL3Q5VWW1 255 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 OOSP1A8MZH6 123 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 HSPE1P61604 102 aaKnown RBP6.39□□□□□ -1.39
MED28-201ENST00000237380 ARF6P62330 175 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 RAE1P78406 368 aaKnown RBP6.39□□□□□ -1.39
MED28-201ENST00000237380 PMS2P11Q13670 270 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 NSUN5P2Q63ZY6 315 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 ABLIM2Q6H8Q1 611 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 PARP12Q9H0J9 701 aaKnown RBP6.39□□□□□ -1.39
MED28-201ENST00000237380 CKAP5Q14008 2032 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 OR10J1P30954 320 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 MGAMO43451 1857 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 A0A1B0GVG6 124 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 ATP5LO75964 103 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 DLK1P80370 383 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 COL9A2Q14055 689 aaPredicted RBP6.39□□□□□ -1.39
MED28-201ENST00000237380 OR9G4Q8NGQ1 327 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 MRGPRFQ96AM1 343 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 APOMO95445 188 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 OR10W1Q8NGF6 305 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 PYCARD-AS1I3L0S3 204 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 AMBPP02760 352 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 CFHR1Q03591 330 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 INPP5JQ15735 1006 aaPredicted RBP6.39□□□□□ -1.39
MED28-201ENST00000237380 ABHD17AQ96GS6 310 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 OVOL2Q9BRP0 275 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 FAM60AQ9NP50 221 aa6.39□□□□□ -1.39
MED28-201ENST00000237380 HOXD3P31249 432 aaPredicted RBP6.38□□□□□ -1.39
MED28-201ENST00000237380 PSG6Q00889 435 aa6.38□□□□□ -1.39
MED28-201ENST00000237380 SP6Q3SY56 376 aa6.38□□□□□ -1.39
MED28-201ENST00000237380 C9orf40Q8IXQ3 194 aa6.38□□□□□ -1.39
MED28-201ENST00000237380 VSIG10L2P0DP72 767 aa6.38□□□□□ -1.39
MED28-201ENST00000237380 TSPO2Q5TGU0 170 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms