RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 RRHO14718 337 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 SHOXO15266 292 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 PROP1O75360 226 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 NDUFA3O95167 84 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 HLA-DRB1P01911 266 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 CSF1P09603 554 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 TNFSF8P32971 234 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 F2RL1P55085 397 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 TAS2R19P59542 299 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 FXYD4P59646 89 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 C5orf64Q2M2E5 130 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 RNASE10Q5GAN6 216 aaKnown RBP8.94□□□□□ -0.98
SF3B6-201ENST00000233468 VAX1Q5SQQ9 334 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 KCTD9Q7L273 389 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 LYSMD2Q8IV50 215 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 COMMD1Q8N668 190 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 POC5Q8NA72 575 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 OR4X2Q8NGF9 303 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 OR52I2Q8NH67 350 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 OSR1Q8TAX0 266 aaPredicted RBP8.94□□□□□ -0.98
SF3B6-201ENST00000233468 MOB3AQ96BX8 217 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 ABHD1Q96SE0 405 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 WNT10AQ9GZT5 417 aa8.94□□□□□ -0.98
SF3B6-201ENST00000233468 IGKV1D-13A0A0B4J2D9 117 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 CREBL2O60519 120 aaPredicted RBP8.93□□□□□ -0.98
SF3B6-201ENST00000233468 FBXO24O75426 580 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 OPN1MWP04001 364 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 OPN1MW2P0DN77 364 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 OPN1MW3P0DN78 364 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 IGKV1-13P0DP09 117 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 VDAC1P21796 283 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 PTBP1P26599 531 aaKnown RBP eCLIP8.93□□□□□ -0.98
SF3B6-201ENST00000233468 KRTAP10-3P60369 221 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 MEF2DQ14814 521 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 VMA21Q3ZAQ7 101 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 FBLN7Q53RD9 439 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 TMEM177Q53S58 311 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 SPANXN2Q5MJ10 180 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 ZNF660Q6AZW8 331 aaPredicted RBP8.93□□□□□ -0.98
SF3B6-201ENST00000233468 MFSD4AQ8N468 514 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 ARRDC1Q8N5I2 433 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 TMEM229BQ8NBD8 167 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 BVESQ8NE79 360 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 OR5AU1Q8NGC0 362 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 OR4S2Q8NH73 311 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 CD300LFQ8TDQ1 290 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 SMIM4Q8WVI0 70 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 TCTEX1D2Q8WW35 142 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 HARBI1Q96MB7 349 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 METTL1Q9UBP6 276 aaKnown RBP8.93□□□□□ -0.98
SF3B6-201ENST00000233468 KLK11Q9UBX7 282 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 ZNF580Q9UK33 172 aa8.93□□□□□ -0.98
SF3B6-201ENST00000233468 PSMB11A5LHX3 300 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 DPPA5A6NC42 116 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 SH2D7A6NKC9 451 aaPredicted RBP8.92□□□□□ -0.98
SF3B6-201ENST00000233468 GSTZ1O43708 216 aaPredicted RBP8.92□□□□□ -0.98
SF3B6-201ENST00000233468 FCGR3BO75015 233 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 CRYZL1O95825 349 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 IGKV1-16P04430 117 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 ECI1P42126 302 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 AP3S2P59780 193 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 TMEM267Q0VDI3 215 aaPredicted RBP8.92□□□□□ -0.98
SF3B6-201ENST00000233468 PSG5Q15238 335 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 C2orf68Q2NKX9 166 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 RNASE12Q5GAN4 147 aaKnown RBP8.92□□□□□ -0.98
SF3B6-201ENST00000233468 Q6ZS46 218 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 SLC38A6Q8IZM9 456 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 VSTM2AQ8TAG5 236 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 DDB2Q92466 427 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 CCL28Q9NRJ3 127 aa8.92□□□□□ -0.98
SF3B6-201ENST00000233468 LINC00473A8K010 186 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 DISC1C4P0D8 188 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 GPR31O00270 319 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 RBFOX2O43251 390 aaKnown RBP eCLIP8.91□□□□□ -0.98
SF3B6-201ENST00000233468 RAB3DO95716 219 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 HRASP01112 189 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 IGLV2-14P01704 120 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 CD3DP04234 171 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 IGF1P05019 195 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 FAUP35544 74 aaKnown RBP8.91□□□□□ -0.98
SF3B6-201ENST00000233468 UCP3P55916 312 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 UBE2KP61086 200 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 DGCR2P98153 550 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 TMEM95Q3KNT9 176 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 PYDC2Q56P42 97 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 AADACL3Q5VUY0 350 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 STEAP1BQ6NZ63 245 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 TEX38Q6PEX7 206 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 ZNF562Q6V9R5 426 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 STPG2Q8N412 459 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 TCTEX1D1Q8N7M0 179 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 TEX45Q8NA69 505 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 C5orf30Q96GV9 206 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 RITA1Q96K30 269 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 OR51J1Q9H342 316 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 FBXL15Q9H469 300 aa8.91□□□□□ -0.98
SF3B6-201ENST00000233468 M0QYG6 137 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 TNFSF12O43508 249 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 SLC25A17O43808 307 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms