RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ID4P47928 161 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 RAB9AP51151 201 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 HSPE1P61604 102 aaKnown RBP7.09□□□□□ -1.27
APOB-201ENST00000233242 RPL8P62917 257 aaKnown RBP7.09□□□□□ -1.27
APOB-201ENST00000233242 LY75O60449 1722 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 MARCH11A6NNE9 402 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 MC5RP33032 325 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 WNT5AP41221 380 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 PSG9Q00887 426 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 LILRA6Q6PI73 481 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 GBF1Q92538 1859 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 SCN5AQ14524 2016 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 SYT8Q8NBV8 401 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 SIGMAR1Q99720 223 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 A0A1B0GWB2 263 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 C3orf80F5H4A9 247 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 NUBP1P53384 320 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 GLRX5Q86SX6 157 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 DIRC2Q96SL1 478 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 KCNK17Q96T54 332 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 PHF7Q9BWX1 381 aaPredicted RBP7.09□□□□□ -1.27
APOB-201ENST00000233242 NPIPB6E9PJ23 425 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 ZNF83P51522 516 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 FBLN7Q53RD9 439 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 B4E171 279 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 TTC9CQ8N5M4 171 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 TMEM208Q9BTX3 173 aa7.09□□□□□ -1.27
APOB-201ENST00000233242 TRBV24-1A0A075B6N3 115 aa7.09□□□□□ -1.28
APOB-201ENST00000233242 SMAD4Q13485 552 aaKnown RBP7.09□□□□□ -1.28
APOB-201ENST00000233242 C2orf83Q53S99 150 aa7.09□□□□□ -1.28
APOB-201ENST00000233242 A0A0G2JK05 382 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 LIFP15018 202 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 TMEM78Q5T7P6 136 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 HEXA-AS1Q9H8Q6 139 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 AHDC1Q5TGY3 1603 aaPredicted RBP7.08□□□□□ -1.28
APOB-201ENST00000233242 TSPAN13O95857 204 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 CENPWQ5EE01 88 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 STPG3Q8N7X2 389 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 WDR54Q9H977 334 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 MKRN2OSH3BPM6 223 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 TYMSP04818 313 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 RPL31P62899 125 aaKnown RBP7.08□□□□□ -1.28
APOB-201ENST00000233242 BIVMQ86UB2 503 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 SFTPA2Q8IWL1 248 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 SFTPA1Q8IWL2 248 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 PTCRAQ6ISU1 281 aaPredicted RBP7.08□□□□□ -1.28
APOB-201ENST00000233242 FAM216AQ8WUB2 273 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 RAB1CQ92928 201 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 NPCDR1Q9BY65 106 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 SDF2L1Q9HCN8 221 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 DOCK7Q96N67 2140 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 RIF1Q5UIP0 2472 aaKnown RBP7.08□□□□□ -1.28
APOB-201ENST00000233242 PATE4P0C8F1 98 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 FUT5Q11128 374 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 MBD3L1Q8WWY6 194 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 TINAGQ9UJW2 476 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 ZNF257Q9Y2Q1 563 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 LRRK1Q38SD2 2015 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 KLF4O43474 513 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 MGPP08493 103 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 RAB1BQ9H0U4 201 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 ZNF205O95201 554 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 LINC01559Q495D7 138 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 HEPN1Q6WQI6 88 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 GLI3P10071 1580 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 DOCK5Q9H7D0 1870 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 TRAV30A0A087WSZ9 112 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 J3QW42 95 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 GAB4Q2WGN9 574 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 ZNF721Q8TF20 911 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 GPR183P32249 361 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 NUTF2P61970 127 aaKnown RBP7.08□□□□□ -1.28
APOB-201ENST00000233242 G6PC2Q9NQR9 355 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 F11RQ9Y624 299 aaKnown RBP7.08□□□□□ -1.28
APOB-201ENST00000233242 EIF4EBP2Q13542 120 aaPredicted RBP7.08□□□□□ -1.28
APOB-201ENST00000233242 FBXW9Q5XUX1 488 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 C9orf40Q8IXQ3 194 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 SERGEFQ9UGK8 458 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 MARF1Q9Y4F3 1742 aaKnown RBP7.08□□□□□ -1.28
APOB-201ENST00000233242 TRAV1-1A0A0B4J248 108 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 FBLN5Q9UBX5 448 aa7.08□□□□□ -1.28
APOB-201ENST00000233242 TNFSF13O75888 250 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 BTCP35070 178 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 DRD3P35462 400 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 SLC25A47Q6Q0C1 308 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 OR4A5Q8NH83 315 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 PRDM14Q9GZV8 571 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 ALKBH6Q3KRA9 238 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 NRN1Q9NPD7 142 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 VEGFBP49765 207 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 LRTM2Q8N967 370 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 CRYBB3P26998 211 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 OR4D5Q8NGN0 318 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 SMOC1Q9H4F8 434 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 PKDREJQ9NTG1 2253 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 A0A1W2PQM1 296 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 IZUMO1RA6ND01 250 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 COX5BP10606 129 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 SNAI3Q3KNW1 292 aa7.07□□□□□ -1.28
APOB-201ENST00000233242 SCTP09683 121 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms