RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 PEMTQ9UBM1 199 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 PRNDQ9UKY0 176 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 NPIPB11E5RHQ5 1161 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 TFF1P04155 84 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 FGF2P09038 288 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 IGFBP3P17936 291 aaPredicted RBP4.32□□□□□ -1.72
RUFY3-201ENST00000226328 RPL11P62913 178 aaKnown RBP4.32□□□□□ -1.72
RUFY3-201ENST00000226328 DHODHQ02127 395 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 GNMTQ14749 295 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 HERPUD1Q15011 391 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 PHLDA2Q53GA4 152 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 ZNF660Q6AZW8 331 aaPredicted RBP4.32□□□□□ -1.72
RUFY3-201ENST00000226328 LAMTOR1Q6IAA8 161 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 STEAP1BQ6NZ63 245 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 PLET1Q6UQ28 207 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 Q6YL49 198 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 PPP1R27Q86WC6 154 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 C11orf53Q8IXP5 236 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 OR5AP2Q8NGF4 316 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 OR1L8Q8NGR8 309 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 SPATA3Q8NHX4 192 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 CASTOR1Q8WTX7 329 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 SLC25A46Q96AG3 418 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 ATP6V0BQ99437 205 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 SLA2Q9H6Q3 261 aa4.32□□□□□ -1.72
RUFY3-201ENST00000226328 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.32□□□□□ -1.72
RUFY3-201ENST00000226328 SMLR1H3BR10 107 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 CLDN34H7C241 214 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 J3QRE1 110 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 M0QYG6 137 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 HPGDSO60760 199 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 TRGV3P03979 118 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 SLC6A1P30531 599 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 ETV6P41212 452 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 NPBWR1P48145 328 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 RPEL1Q2QD12 228 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 Q56UQ5 140 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 LGI3Q8N145 548 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 OR5M8Q8NGP6 311 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 ABHD14BQ96IU4 210 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 C11orf54Q9H0W9 315 aaPredicted RBP4.31□□□□□ -1.72
RUFY3-201ENST00000226328 TSSC4Q9Y5U2 329 aaPredicted RBP4.31□□□□□ -1.72
RUFY3-201ENST00000226328 UNC79Q9P2D8 2635 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 HCFC1P51610 2035 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 IGKV1-27A0A075B6S5 117 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 IGHV1-3A0A0C4DH29 117 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 IGKV1-12A0A0C4DH73 117 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 DUS4LO95620 317 aaKnown RBP4.31□□□□□ -1.72
RUFY3-201ENST00000226328 IFNA10P01566 189 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 IGKV1D-12P01611 117 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 ZNF816Q0VGE8 651 aaPredicted RBP4.31□□□□□ -1.72
RUFY3-201ENST00000226328 SPRNQ5BIV9 151 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 DEFB121Q5J5C9 76 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 LRRTM1Q86UE6 522 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 SELENOHQ8IZQ5 122 aaKnown RBP4.31□□□□□ -1.72
RUFY3-201ENST00000226328 Q8N402 240 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 GINS3Q9BRX5 216 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 SCGB1D1O95968 90 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 HPRT1P00492 218 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 C4BPBP20851 252 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 ATP5G2Q06055 141 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 ZNF260Q3ZCT1 412 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 MORN2Q502X0 79 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 Q6P435 159 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 SLC25A48Q6ZT89 311 aaKnown RBP4.31□□□□□ -1.72
RUFY3-201ENST00000226328 LDLRAD3Q86YD5 345 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 LINC00311Q8N616 119 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 ZNF645Q8N7E2 425 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 GPX8Q8TED1 209 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 FBLIM1Q8WUP2 373 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 ARPC1AQ92747 370 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 ST6GALNAC6Q969X2 333 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 TMEM230Q96A57 120 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 MOB3AQ96BX8 217 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 SLC35E1Q96K37 410 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 TUBA4BQ9H853 241 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 PPP1R14DQ9NXH3 145 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 FBLN5Q9UBX5 448 aa4.31□□□□□ -1.72
RUFY3-201ENST00000226328 FOXA2Q9Y261 457 aaPredicted RBP4.31□□□□□ -1.72
RUFY3-201ENST00000226328 DYSFO75923 2080 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 AKAP9Q99996 3911 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 NUPL2O15504 423 aaKnown RBP4.3□□□□□ -1.72
RUFY3-201ENST00000226328 PET100P0DJ07 73 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 PSKH1P11801 424 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 ZNF45Q02386 682 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 ASCL4Q6XD76 172 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 TMEM91Q6ZNR0 172 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 UBAC2Q8NBM4 344 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 LY6G5BQ8NDX9 201 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 KLHL30-AS1Q8NEE0 82 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 RGP1Q92546 391 aaPredicted RBP4.3□□□□□ -1.72
RUFY3-201ENST00000226328 ASCL2Q99929 193 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 MRPL20Q9BYC9 149 aaKnown RBP4.3□□□□□ -1.72
RUFY3-201ENST00000226328 PPP1R3EQ9H7J1 279 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 PLEKHA2Q9HB19 425 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 ZNF230Q9UIE0 474 aaPredicted RBP4.3□□□□□ -1.72
RUFY3-201ENST00000226328 VSIG4Q9Y279 399 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 RBMX2Q9Y388 322 aaKnown RBP4.3□□□□□ -1.72
RUFY3-201ENST00000226328 WSB1Q9Y6I7 421 aa4.3□□□□□ -1.72
RUFY3-201ENST00000226328 MAST4O15021 2626 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms