RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 VDAC1P21796 283 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 HRH1P35367 487 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 TAS2R46P59540 309 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 EIF4EBP1Q13541 118 aaPredicted RBP9.95□□□□□ -0.82
LSM5-201ENST00000223084 RTL8BQ17RB0 113 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 TMEM177Q53S58 311 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 C18orf65Q6ZTR6 163 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 OVCH2Q7RTZ1 564 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 TMEM17Q86X19 198 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 ABHD1Q96SE0 405 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 SCPEP1Q9HB40 452 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 TAS2R8Q9NYW2 309 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 ADAM30Q9UKF2 790 aa9.95□□□□□ -0.82
LSM5-201ENST00000223084 SULT1C2O00338 296 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 SPDEFO95238 335 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 CA2P00918 260 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 CRYGBP07316 175 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 RRASP10301 218 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 EGR2P11161 476 aaPredicted RBP9.94□□□□□ -0.82
LSM5-201ENST00000223084 RCVRNP35243 200 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 LGALS7P47929 136 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 TAGLNQ01995 201 aaKnown RBP9.94□□□□□ -0.82
LSM5-201ENST00000223084 CFHR3Q02985 330 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 PJVKQ0ZLH3 352 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 CBX3Q13185 183 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 DYRK1AQ13627 763 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 ZNF660Q6AZW8 331 aaPredicted RBP9.94□□□□□ -0.82
LSM5-201ENST00000223084 TEX38Q6PEX7 206 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 DHRS11Q6UWP2 260 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 KCTD9Q7L273 389 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 MFSD4AQ8N468 514 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 OR52I2Q8NH67 350 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 ABHD5Q8WTS1 349 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 TCTEX1D2Q8WW35 142 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 ZNF2Q9BSG1 426 aaPredicted RBP9.94□□□□□ -0.82
LSM5-201ENST00000223084 FAM103A1Q9BTL3 118 aaKnown RBP9.94□□□□□ -0.82
LSM5-201ENST00000223084 SLIRPQ9GZT3 109 aaKnown RBP9.94□□□□□ -0.82
LSM5-201ENST00000223084 C6orf62Q9GZU0 229 aaPredicted RBP9.94□□□□□ -0.82
LSM5-201ENST00000223084 KLK11Q9UBX7 282 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 A3GALT2U3KPV4 340 aa9.94□□□□□ -0.82
LSM5-201ENST00000223084 TRAV41A0A0B4J266 112 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 ARPC1BO15143 372 aaKnown RBP9.93□□□□□ -0.82
LSM5-201ENST00000223084 RPLP1P05386 114 aaKnown RBP9.93□□□□□ -0.82
LSM5-201ENST00000223084 BRWD1-AS2P59051 145 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 HERV-K104P61576 105 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 RPL23AP62750 156 aaKnown RBP9.93□□□□□ -0.82
LSM5-201ENST00000223084 GNB1P62873 340 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 ECSCRQ19T08 205 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 IDO2Q6ZQW0 420 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 ZNF818PQ6ZRF7 136 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 COMMD1Q8N668 190 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 OR4F17Q8NGA8 305 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 MOB3AQ96BX8 217 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 OR4F4Q96R69 305 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 HSD17B10Q99714 261 aaKnown RBP9.93□□□□□ -0.82
LSM5-201ENST00000223084 DCUN1D5Q9BTE7 237 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 GON7Q9BXV9 100 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 RBM38Q9H0Z9 239 aaKnown RBP9.93□□□□□ -0.82
LSM5-201ENST00000223084 PRELID3BQ9Y3B1 194 aa9.93□□□□□ -0.82
LSM5-201ENST00000223084 M0QYG6 137 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 IGHG4P01861 327 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 PF4V1P10720 104 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 PPIFP30405 207 aaKnown RBP9.92□□□□□ -0.82
LSM5-201ENST00000223084 GNRHRP30968 328 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 SSBP2P81877 361 aaPredicted RBP9.92□□□□□ -0.82
LSM5-201ENST00000223084 DGCR2P98153 550 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 FOXE3Q13461 319 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 FXYD3Q14802 87 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 MRGPRG-AS1Q2M3A8 158 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 CXorf66Q5JRM2 361 aaPredicted RBP9.92□□□□□ -0.82
LSM5-201ENST00000223084 ZNF562Q6V9R5 426 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 ZNF66Q6ZN08 573 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 PPP1R27Q86WC6 154 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 GRPEL2Q8TAA5 225 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 DIRAS2Q96HU8 199 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 FXYD6Q9H0Q3 95 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 KLK15Q9H2R5 256 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 ZNF580Q9UK33 172 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 NUBP2Q9Y5Y2 271 aa9.92□□□□□ -0.82
LSM5-201ENST00000223084 NUDT19A8MXV4 375 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 ELANEP08246 267 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 SAA1P0DJI8 122 aaPredicted RBP9.91□□□□□ -0.82
LSM5-201ENST00000223084 CRIP2P52943 208 aaPredicted RBP9.91□□□□□ -0.82
LSM5-201ENST00000223084 UBE2KP61086 200 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 TSPAN5P62079 268 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 MSMO1Q15800 293 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 VMA21Q3ZAQ7 101 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 C19orf54Q5BKX5 351 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 UNQ5815/PRO19632Q6UWF5 114 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 C8orf86Q6ZUL3 223 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 VKORC1L1Q8N0U8 176 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 MINDY2Q8NBR6 621 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 ZBTB34Q8NCN2 500 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 KLHL30-AS1Q8NEE0 82 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 LFNGQ8NES3 379 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 OR6F1Q8NGZ6 308 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 OR51H1Q8NH63 302 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 OR4S2Q8NH73 311 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 MCFD2Q8NI22 146 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 OSR1Q8TAX0 266 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms