RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ZNF66Q6ZN08 573 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 ABHD5Q8WTS1 349 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 LHX4Q969G2 390 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 DUSP13Q9UII6 198 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 LRRC30A6NM36 301 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 IGHV3-13P01766 116 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 OPN1MWP04001 364 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 OPN1MW2P0DN77 364 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 OPN1MW3P0DN78 364 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 SSTR5P35346 364 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 CD81P60033 236 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 LURAP1LQ8IV03 231 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 FAM216AQ8WUB2 273 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.48■□□□□ 0.55
CCDC9-201ENST00000221922 DMRT1Q9Y5R6 373 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 PMS2P5A8MQ11 134 aa18.47■□□□□ 0.55
CCDC9-201ENST00000221922 PHOX2AO14813 284 aa18.47■□□□□ 0.55
CCDC9-201ENST00000221922 KRASP01116 189 aa18.47■□□□□ 0.55
CCDC9-201ENST00000221922 TFF1P04155 84 aa18.47■□□□□ 0.55
CCDC9-201ENST00000221922 G6PCP35575 357 aa18.47■□□□□ 0.55
CCDC9-201ENST00000221922 GLRXP35754 106 aa18.47■□□□□ 0.55
CCDC9-201ENST00000221922 BRWD1-AS2P59051 145 aa18.47■□□□□ 0.55
CCDC9-201ENST00000221922 ABHD17AQ96GS6 310 aa18.47■□□□□ 0.55
CCDC9-201ENST00000221922 HSD17B10Q99714 261 aaKnown RBP18.47■□□□□ 0.55
CCDC9-201ENST00000221922 MRPL37Q9BZE1 423 aaKnown RBP18.47■□□□□ 0.55
CCDC9-201ENST00000221922 TRAV20A0A0B4J274 112 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 ODAMA1E959 279 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 KLF3P57682 345 aaPredicted RBP18.46■□□□□ 0.55
CCDC9-201ENST00000221922 NKX6-1P78426 367 aaPredicted RBP18.46■□□□□ 0.55
CCDC9-201ENST00000221922 MEF2BQ02080 365 aaPredicted RBP18.46■□□□□ 0.55
CCDC9-201ENST00000221922 MSMPQ1L6U9 139 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 ACSM6Q6P461 480 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 HIST3H2BBQ8N257 126 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 TMEM147Q9BVK8 224 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 NAT8Q9UHE5 227 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 USF3Q68DE3 2245 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 NDUFS6O75380 124 aaKnown RBP18.46■□□□□ 0.55
CCDC9-201ENST00000221922 TRGC1P0CF51 173 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 ZNF816Q0VGE8 651 aaPredicted RBP18.46■□□□□ 0.55
CCDC9-201ENST00000221922 TPRX1Q8N7U7 411 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 FRZBQ92765 325 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 SNX22Q96L94 193 aa18.46■□□□□ 0.55
CCDC9-201ENST00000221922 C15orf65H3BRN8 121 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 PPP1R2P9O14990 202 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 CLDN14O95500 239 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 EGR1P18146 543 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 GZMHP20718 246 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 CYP2G1PQ6ZSU1 146 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 LRP11Q86VZ4 500 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 SSX3Q99909 188 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 DIDO1Q9BTC0 2240 aaKnown RBP18.45■□□□□ 0.54
CCDC9-201ENST00000221922 S1PR2O95136 353 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 MBP02144 154 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 CD55P08174 381 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 SOD3P08294 240 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 TDGF1P3P51864 188 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 FOXC1Q12948 553 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 OR2B11Q5JQS5 317 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 CLN8Q9UBY8 286 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 TP53TG5Q9Y2B4 290 aa18.45■□□□□ 0.54
CCDC9-201ENST00000221922 IGKV1D-17A0A075B6S4 117 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 CTXND1A0A1B0GTU2 59 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 C17orf98A8MV24 154 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 A8MXE2 369 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 TMEM250H0YL14 139 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 MGST3O14880 152 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 RAB29O14966 203 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 EDDM3AQ14507 147 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 FAM209BQ5JX69 171 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 ALKBH2Q6NS38 261 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 FAM53AQ6NSI3 398 aaPredicted RBP18.44■□□□□ 0.54
CCDC9-201ENST00000221922 MEGF10Q96KG7 1140 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 OR2V2Q96R30 315 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 SMIM7Q9BQ49 75 aa18.44■□□□□ 0.54
CCDC9-201ENST00000221922 KBTBD11O94819 623 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 TMEM241Q24JQ0 296 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 VWC2Q2TAL6 325 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 GFI1BQ5VTD9 330 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 BTNL3Q6UXE8 466 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 SPACA3Q8IXA5 215 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 RFESDQ8TAC1 157 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 PSG11Q9UQ72 335 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 DSPP15924 2871 aaKnown RBP18.43■□□□□ 0.54
CCDC9-201ENST00000221922 IGHV3-43A0A0B4J1X8 118 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 IGHV3-43DP0DP04 118 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 GCSAMQ8N6F7 178 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 DTD1Q8TEA8 209 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 CIB3Q96Q77 187 aaPredicted RBP18.43■□□□□ 0.54
CCDC9-201ENST00000221922 GPR61Q9BZJ8 451 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 JPT1Q9UK76 154 aa18.43■□□□□ 0.54
CCDC9-201ENST00000221922 PSMB3P49720 205 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 CR1LQ2VPA4 569 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 Q3ZCU0 254 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 NCR3LG1Q68D85 454 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 H2BFWTQ7Z2G1 175 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 OR10P1Q8NGE3 313 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 PYGO2Q9BRQ0 406 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 ANKRD11Q6UB99 2663 aaPredicted RBP18.42■□□□□ 0.54
CCDC9-201ENST00000221922 IGLV3-9A0A075B6K5 115 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 PRRG2O14669 202 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms