RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ACSF3Q4G176 576 aaPredicted RBP11.53□□□□□ -0.56
GABPB1-201ENST00000220429 OR10P1Q8NGE3 313 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 OR8B12Q8NGG6 310 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 NCOR1O75376 2440 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 A0A1W2PP11 408 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 CD5LO43866 347 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 S1PR2O95136 353 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 PSMB3P49720 205 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 ZNF121P58317 390 aaPredicted RBP11.53□□□□□ -0.56
GABPB1-201ENST00000220429 RPS18P62269 152 aaKnown RBP11.53□□□□□ -0.56
GABPB1-201ENST00000220429 RELBQ01201 579 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 RNF144BQ7Z419 303 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 SIGLEC12Q96PQ1 595 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 UCN2Q96RP3 112 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 MOB1AQ9H8S9 216 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 IGKV1D-8A0A087WSZ0 117 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 NKX2-6A6NCS4 301 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 SIRPB1O00241 398 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 IGLL1P15814 213 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 MDH2P40926 338 aaKnown RBP11.52□□□□□ -0.56
GABPB1-201ENST00000220429 UFSP1Q6NVU6 142 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 GTF2H5Q6ZYL4 71 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 OR2Z1Q8NG97 314 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 OR4F5Q8NH21 305 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 NEUROG1Q92886 237 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 ZC2HC1AQ96GY0 325 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 SPACA5Q96QH8 159 aa11.52□□□□□ -0.56
GABPB1-201ENST00000220429 AHCTF1Q8WYP5 2266 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 MLNRO43193 412 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 REG1AP05451 166 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 ZNF728P0DKX0 622 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 FAM58AQ8N1B3 248 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 OR5D14Q8NGL3 314 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 LHX4Q969G2 390 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 CHRDL1Q9BU40 450 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 GNB4Q9HAV0 340 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 PGPEP1Q9NXJ5 209 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 GPR179Q6PRD1 2367 aa11.52□□□□□ -0.57
GABPB1-201ENST00000220429 TLX3O43711 291 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-201ENST00000220429 UCP1P25874 307 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 PHLDA2Q53GA4 152 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 HAPLN4Q86UW8 402 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 KCNS1Q96KK3 526 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 C1orf147Q96MC9 270 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-201ENST00000220429 NPVFQ9HCQ7 196 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 PCSK5Q92824 1860 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 A0A1W2PS18 150 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 ZNF205O95201 554 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 TMEM50AO95807 157 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 ZNF17P17021 662 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 ACP1P24666 158 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 HLA-DRB5Q30154 266 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 LCN12Q6JVE5 192 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 C12orf54Q6X4T0 127 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 PPP1R32Q7Z5V6 425 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 OR5AS1Q8N127 324 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 SSBP4Q9BWG4 385 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-201ENST00000220429 PPP1R3CQ9UQK1 317 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 CELSR3Q9NYQ7 3312 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 DOCK11Q5JSL3 2073 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 A0A0G2JMM0 328 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 A0A0J9YW62 118 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 A0A1W2PPB8 328 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 KIR3DP1A8MWS1 328 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 E9PLN8 166 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 J3KRW8 73 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 PHF1O43189 567 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-201ENST00000220429 SMIM17P0DL12 118 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 GUCA1AP43080 201 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-201ENST00000220429 Q0VFX4 171 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 C19orf35Q6ZS72 473 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 OR10V1Q8NGI7 309 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 SLC25A40Q8TBP6 338 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 SCGB1C1Q8TD33 95 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 TMEM54Q969K7 222 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 BORCS7Q96B45 105 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 OR10A2Q9H208 303 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 THYN1Q9P016 225 aa11.51□□□□□ -0.57
GABPB1-201ENST00000220429 SAA2-SAA4A0A096LPE2 208 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 C5orf63A6NC05 138 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 TNFSF11O14788 317 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 CA2P00918 260 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 CELA3BP08861 270 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 OTX2P32243 289 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 KIAA1644Q3SXP7 199 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 CXorf66Q5JRM2 361 aaPredicted RBP11.5□□□□□ -0.57
GABPB1-201ENST00000220429 C10orf128Q5T292 105 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 C9orf135Q5VTT2 229 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 FAM57BQ71RH2 274 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 LIME1Q9H400 295 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 BDP1A6H8Y1 2624 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 NPIPA3F8WFD2 350 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 ZNF324O75467 553 aaPredicted RBP11.5□□□□□ -0.57
GABPB1-201ENST00000220429 CRYGCP07315 174 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 CCL1P22362 96 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 OR3A4PP47883 348 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 CEBPDP49716 269 aaPredicted RBP11.5□□□□□ -0.57
GABPB1-201ENST00000220429 RAB31Q13636 194 aa11.5□□□□□ -0.57
GABPB1-201ENST00000220429 DCAF12Q5T6F0 453 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms