RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 OR4A16Q8NH70 328 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 DTD1Q8TEA8 209 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 ZNF251Q9BRH9 671 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 SH3BGRL3Q9H299 93 aa14.3□□□□□ -0.12
VRK1-201ENST00000216639 CCL3L1P16619 93 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 COL8A2P25067 703 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 PLA2G2EQ9NZK7 142 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 CEBPZOSA8MTT3 80 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 FCN3O75636 299 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 SCAF4O95104 1147 aaKnown RBP14.29□□□□□ -0.12
VRK1-201ENST00000216639 GNLYP22749 145 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 BTNL8Q6UX41 500 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 TMEM182Q6ZP80 229 aaPredicted RBP14.29□□□□□ -0.12
VRK1-201ENST00000216639 LILRB2Q8N423 598 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 SCGB1C1Q8TD33 95 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 NARS2Q96I59 477 aaKnown RBP14.29□□□□□ -0.12
VRK1-201ENST00000216639 CLCC1Q96S66 551 aa14.29□□□□□ -0.12
VRK1-201ENST00000216639 GPR37O15354 613 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 RTL8BQ17RB0 113 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 AARDQ4LEZ3 155 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 TMEM14EPQ6UXP3 125 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 C1orf229Q6ZS94 237 aaPredicted RBP14.28□□□□□ -0.12
VRK1-201ENST00000216639 C8orf31Q8N9H6 132 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 ZNF383Q8NA42 475 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 BPIFCQ8NFQ6 507 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 OR52E5Q8NH55 327 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 NEU4Q8WWR8 484 aaPredicted RBP14.28□□□□□ -0.12
VRK1-201ENST00000216639 RALYQ9UKM9 306 aaKnown RBP14.28□□□□□ -0.12
VRK1-201ENST00000216639 NUP50Q9UKX7 468 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 SPTA1P02549 2419 aa14.28□□□□□ -0.12
VRK1-201ENST00000216639 A0A1W2PPH5 198 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 CRYZL1O95825 349 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 TSPAN15O95858 294 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 HRASP01112 189 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 IFNA17P01571 189 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 IGHV2-70P01814 119 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 OR9G9P0C7N8 305 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 ZNF616Q08AN1 781 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 TUSC1Q2TAM9 212 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 TMEM155Q4W5P6 130 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 DHRS7BQ6IAN0 325 aaPredicted RBP14.27□□□□□ -0.12
VRK1-201ENST00000216639 SSX9Q7RTT3 188 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 COMMD1Q8N668 190 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 LYPD6BQ8NI32 183 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 ITLN2Q8WWU7 325 aaPredicted RBP14.27□□□□□ -0.12
VRK1-201ENST00000216639 TMEM140Q9NV12 185 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 ARFGEF3Q5TH69 2177 aa14.27□□□□□ -0.12
VRK1-201ENST00000216639 LYNX1G3V0Z9 82 aa14.27□□□□□ -0.13
VRK1-201ENST00000216639 LYNX1P0DP58 116 aa14.27□□□□□ -0.13
VRK1-201ENST00000216639 UQCRFS1P47985 274 aa14.27□□□□□ -0.13
VRK1-201ENST00000216639 SPCS3P61009 180 aa14.27□□□□□ -0.13
VRK1-201ENST00000216639 RPP30P78346 268 aaKnown RBP14.27□□□□□ -0.13
VRK1-201ENST00000216639 TAGLNQ01995 201 aaKnown RBP14.27□□□□□ -0.13
VRK1-201ENST00000216639 ATP6V1FQ16864 119 aa14.27□□□□□ -0.13
VRK1-201ENST00000216639 ZNF833PQ6ZTB9 187 aa14.27□□□□□ -0.13
VRK1-201ENST00000216639 TIMD4Q96H15 378 aa14.27□□□□□ -0.13
VRK1-201ENST00000216639 AIFM2Q9BRQ8 373 aa14.27□□□□□ -0.13
VRK1-201ENST00000216639 QTRT1Q9BXR0 403 aaKnown RBP14.27□□□□□ -0.13
VRK1-201ENST00000216639 HCFC1P51610 2035 aa14.26□□□□□ -0.13
VRK1-201ENST00000216639 OR2B8PP59922 312 aa14.26□□□□□ -0.13
VRK1-201ENST00000216639 SLC38A11Q08AI6 406 aa14.26□□□□□ -0.13
VRK1-201ENST00000216639 C11orf71Q6IPW1 123 aa14.26□□□□□ -0.13
VRK1-201ENST00000216639 FAM71F2Q6NXP2 309 aa14.26□□□□□ -0.13
VRK1-201ENST00000216639 LINC00311Q8N616 119 aa14.26□□□□□ -0.13
VRK1-201ENST00000216639 ZNF525Q8N782 197 aa14.26□□□□□ -0.13
VRK1-201ENST00000216639 OR10X1Q8NGY0 326 aa14.26□□□□□ -0.13
VRK1-201ENST00000216639 PINX1Q96BK5 328 aaKnown RBP14.26□□□□□ -0.13
VRK1-201ENST00000216639 PARD6GQ9BYG4 376 aaPredicted RBP14.26□□□□□ -0.13
VRK1-201ENST00000216639 SLC35D1Q9NTN3 355 aa14.26□□□□□ -0.13
VRK1-201ENST00000216639 CT45A6P0DMU7 189 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 CT45A5P0DMU8 189 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 CT45A7P0DMV0 189 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 AKR1C8PQ5T2L2 129 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 FAM213BQ8TBF2 198 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 ZNF596Q8TC21 504 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 RAB1CQ92928 201 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 TMEM186Q96B77 213 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 RHOVQ96L33 236 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 TREM1Q9NP99 234 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 MIOXQ9UGB7 285 aa14.25□□□□□ -0.13
VRK1-201ENST00000216639 A0A087X0M5 115 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 A0A1B0GX30 115 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 TMEM218A2RU14 115 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 J3QR06 171 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 APOA2P02652 100 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 OR8U8P0C7N1 319 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 DLX6P56179 175 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 ERVFRD-1P60508 538 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 RELBQ01201 579 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 ARL16Q0P5N6 197 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 POU2AF1Q16633 256 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 PDLIM3Q53GG5 364 aaPredicted RBP14.24□□□□□ -0.13
VRK1-201ENST00000216639 OR8G2PQ6IF36 304 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 DPPA3Q6W0C5 159 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 HAPLN4Q86UW8 402 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 ZNF429Q86V71 674 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 THNSL2Q86YJ6 484 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 VKORC1L1Q8N0U8 176 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 OR10P1Q8NGE3 313 aa14.24□□□□□ -0.13
VRK1-201ENST00000216639 OR9G1Q8NH87 305 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms