RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 UBAC2Q8NBM4 344 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 SPOCK3Q9BQ16 436 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 C11orf1Q9H5F2 150 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 POMT1Q9Y6A1 747 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 TSPAN4O14817 238 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 GPR137BO60478 399 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 P2RY1P47900 373 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 TCTEX1D1Q8N7M0 179 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 LSM10Q969L4 123 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ARV1Q9H2C2 271 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 HRH4Q9H3N8 390 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ZFP57Q9NU63 452 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 MIOXQ9UGB7 285 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 GAB2Q9UQC2 676 aa16.14■□□□□ 0.17
TNFRSF1A-201ENST00000162749 M0R1X1 148 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 RAB29O14966 203 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ZNF816Q0VGE8 651 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 PJVKQ0ZLH3 352 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 IZUMO4Q1ZYL8 232 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 GPR157Q5UAW9 335 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 NCR3LG1Q68D85 454 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 OR8B3Q8NGG8 313 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 GPR146Q96CH1 333 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 OR8B2Q96RD0 313 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ZNF251Q9BRH9 671 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 FAM212BQ9NTI7 297 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 CSMD2Q7Z408 3487 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 TENM4Q6N022 2769 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 NUDT19A8MXV4 375 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 OVOL3O00110 214 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 GPR37O15354 613 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 NUPL2O15504 423 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 MED6O75586 246 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 EPHA1P21709 976 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 EFNA4P52798 201 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 NHLH2Q02577 135 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 IL34Q6ZMJ4 242 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 Q6ZRM9 215 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 LYG1Q8N1E2 194 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 RNASE11Q8TAA1 199 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 NEIL1Q96FI4 390 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ZNRD1Q9P1U0 126 aa16.13■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ATG12O94817 140 aa16.12■□□□□ 0.17
TNFRSF1A-201ENST00000162749 S1PR2O95136 353 aa16.12■□□□□ 0.17
TNFRSF1A-201ENST00000162749 NKX2-1P43699 371 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-201ENST00000162749 TLE4Q04727 773 aa16.12■□□□□ 0.17
TNFRSF1A-201ENST00000162749 WDR25Q64LD2 544 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-201ENST00000162749 C11orf42Q8N5U0 333 aa16.12■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-201ENST00000162749 SLC25A6P12236 298 aa16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 CXorf66Q5JRM2 361 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 TMEM231Q9H6L2 316 aa16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 SVEP1Q4LDE5 3571 aa16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 A0A1B0GU03 582 aa16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 DNASE2O00115 360 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 PITX3O75364 302 aa16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 BTNL8Q6UX41 500 aa16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 IGFBPL1Q8WX77 278 aa16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 PTPN13Q12923 2485 aa16.11■□□□□ 0.17
TNFRSF1A-201ENST00000162749 KRASP01116 189 aa16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ID3Q02535 119 aa16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 CACNG5Q9UF02 275 aa16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 IGHV1-8P0DP01 117 aa16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 POLR2GP62487 172 aaKnown RBP eCLIP16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 C10orf91Q5T1B1 145 aa16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 CD300LFQ8TDQ1 290 aa16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 RAB39BQ96DA2 213 aa16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 PATZ1Q9HBE1 687 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 ANKRD17O75179 2603 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-201ENST00000162749 FBN2P35556 2912 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 FCGR3BO75015 233 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 G6PCP35575 357 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 GPR6P46095 362 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 CAV2P51636 162 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 GUCA2BQ16661 112 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 C8orf46Q8TAG6 207 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 DDB2Q92466 427 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 GINS3Q9BRX5 216 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 NKX6-2Q9C056 277 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 PARP11Q9NR21 331 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 FAM96BQ9Y3D0 163 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 MMP24Q9Y5R2 645 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 TNCP24821 2201 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 A0A087X0M5 115 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 A0A1B0GX30 115 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 FAM74A7A6NL05 159 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 NXPH3O95157 252 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 P0C879 139 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 BLOC1S1P78537 153 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 FAM74A3Q4VXF1 159 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 MAGT1Q9H0U3 335 aa16.09■□□□□ 0.17
TNFRSF1A-201ENST00000162749 FAM24AA6NFZ4 105 aa16.08■□□□□ 0.16
TNFRSF1A-201ENST00000162749 EWSR1Q01844 656 aaKnown RBP eCLIP16.08■□□□□ 0.16
TNFRSF1A-201ENST00000162749 Q6ZRG5 221 aa16.08■□□□□ 0.16
TNFRSF1A-201ENST00000162749 PUSL1Q8N0Z8 303 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-201ENST00000162749 OR2C3Q8N628 320 aa16.08■□□□□ 0.16
TNFRSF1A-201ENST00000162749 TSNAXQ99598 290 aaKnown RBP16.08■□□□□ 0.16
TNFRSF1A-201ENST00000162749 TREM1Q9NP99 234 aa16.08■□□□□ 0.16
TNFRSF1A-201ENST00000162749 UQCC1Q9NVA1 299 aa16.08■□□□□ 0.16
TNFRSF1A-201ENST00000162749 POLQO75417 2590 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms