RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 NUPR1O60356 82 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 NDUFB4O95168 129 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 MPV17P39210 176 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 MEOX1P50221 254 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 ATP6V1FQ16864 119 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 Q3ZCU0 254 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 TCF23Q7RTU1 214 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 LINC01551Q86U37 167 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 TMEM256Q8N2U0 113 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 SDSLQ96GA7 329 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 COQ2Q96H96 371 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 QTRT1Q9BXR0 403 aaKnown RBP16.93■□□□□ 0.3
RCN1-201ENST00000054950 TMEM30CPA0ZSE6 113 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 MBP02144 154 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 PSG7Q13046 419 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 FBXW9Q5XUX1 488 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 Q8IYB0 196 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 ACY3Q96HD9 319 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 HCFC1P51610 2035 aa16.93■□□□□ 0.3
RCN1-201ENST00000054950 ATG101Q9BSB4 218 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 NDUFAF3Q9BU61 184 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 FZR1Q9UM11 496 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 A0A0U1RQK1 487 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 ZNF320A2RRD8 509 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 C15orf62A8K5M9 175 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 LYZL6O75951 148 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 CD82P27701 267 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 FAM234AQ9H0X4 552 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 OBP2BQ9NPH6 170 aa16.92■□□□□ 0.3
RCN1-201ENST00000054950 A0A1W2PNU3 283 aaPredicted RBP16.91■□□□□ 0.3
RCN1-201ENST00000054950 IGHV3-13P01766 116 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 IGHV3-7P01780 117 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 OR9G9P0C7N8 305 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 CNN1P51911 297 aaKnown RBP16.91■□□□□ 0.3
RCN1-201ENST00000054950 ZNF766Q5HY98 468 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 PRAMEF6Q5VXH4 476 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 C2orf88Q9BSF0 95 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 PSG11Q9UQ72 335 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 MLNRO43193 412 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 CATR1Q13166 79 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 TEX38Q6PEX7 206 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 LRP11Q86VZ4 500 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 GCNT2Q8N0V5 402 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 NINJ1Q92982 152 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 TMEM18Q96B42 140 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 GPR179Q6PRD1 2367 aa16.91■□□□□ 0.3
RCN1-201ENST00000054950 RBFOX2O43251 390 aaKnown RBP eCLIP16.9■□□□□ 0.3
RCN1-201ENST00000054950 CLDN14O95500 239 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 GCGP01275 180 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 CD33P20138 364 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 SRP14P37108 136 aaKnown RBP16.9■□□□□ 0.3
RCN1-201ENST00000054950 PAX5Q02548 391 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 DCAF10Q5QP82 559 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 VKORC1L1Q8N0U8 176 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 CISD2Q8N5K1 135 aaKnown RBP16.9■□□□□ 0.3
RCN1-201ENST00000054950 OR13A1Q8NGR1 328 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 TRBV20OR9-2A0A075B6H5 130 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 MARCH11A6NNE9 402 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 TDGF1P13385 188 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 NANOS1Q8WY41 292 aaKnown RBP16.9■□□□□ 0.3
RCN1-201ENST00000054950 NOL4LQ96MY1 436 aaPredicted RBP16.9■□□□□ 0.3
RCN1-201ENST00000054950 PTPRBP23467 1997 aa16.9■□□□□ 0.3
RCN1-201ENST00000054950 GCH1P30793 250 aa16.89■□□□□ 0.3
RCN1-201ENST00000054950 RPL15P61313 204 aaKnown RBP16.89■□□□□ 0.3
RCN1-201ENST00000054950 SLC10A1Q14973 349 aa16.89■□□□□ 0.3
RCN1-201ENST00000054950 VWC2Q2TAL6 325 aa16.89■□□□□ 0.3
RCN1-201ENST00000054950 GBGT1Q8N5D6 347 aa16.89■□□□□ 0.3
RCN1-201ENST00000054950 MRPL37Q9BZE1 423 aaKnown RBP16.89■□□□□ 0.3
RCN1-201ENST00000054950 SPRR3Q9UBC9 169 aa16.89■□□□□ 0.3
RCN1-201ENST00000054950 TRAPPC1Q9Y5R8 145 aa16.89■□□□□ 0.3
RCN1-201ENST00000054950 TET2Q6N021 2002 aaPredicted RBP16.89■□□□□ 0.29
RCN1-201ENST00000054950 RAB29O14966 203 aa16.89■□□□□ 0.29
RCN1-201ENST00000054950 TYMSP04818 313 aa16.89■□□□□ 0.29
RCN1-201ENST00000054950 ACOT6Q3I5F7 207 aaPredicted RBP16.89■□□□□ 0.29
RCN1-201ENST00000054950 RNFT1Q5M7Z0 435 aa16.89■□□□□ 0.29
RCN1-201ENST00000054950 KCNIP4Q6PIL6 250 aa16.89■□□□□ 0.29
RCN1-201ENST00000054950 CBLN4Q9NTU7 201 aa16.89■□□□□ 0.29
RCN1-201ENST00000054950 OOEPA6NGQ2 149 aa16.88■□□□□ 0.29
RCN1-201ENST00000054950 SCGB1D1O95968 90 aa16.88■□□□□ 0.29
RCN1-201ENST00000054950 C11orf53Q8IXP5 236 aa16.88■□□□□ 0.29
RCN1-201ENST00000054950 NCOR1O75376 2440 aa16.88■□□□□ 0.29
RCN1-201ENST00000054950 GRIFINA4D1Z8 144 aa16.88■□□□□ 0.29
RCN1-201ENST00000054950 VENTXO95231 258 aa16.88■□□□□ 0.29
RCN1-201ENST00000054950 ZBTB34Q8NCN2 500 aa16.88■□□□□ 0.29
RCN1-201ENST00000054950 IL17BQ9UHF5 180 aa16.88■□□□□ 0.29
RCN1-201ENST00000054950 C17orf112F2Z3M2 114 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 AGFG2O95081 481 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 CD1BP29016 333 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 THBS3P49746 956 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 ATP1A1-AS1Q5TC04 95 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 SP1P08047 785 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 EDDM3AQ14507 147 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 SGMS2Q8NHU3 365 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 KLF14Q8TD94 323 aaPredicted RBP16.87■□□□□ 0.29
RCN1-201ENST00000054950 R3HDM4Q96D70 268 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 SPRY4Q9C004 299 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 HES4Q9HCC6 221 aa16.87■□□□□ 0.29
RCN1-201ENST00000054950 ARL14EPLP0DKL9 152 aa16.86■□□□□ 0.29
RCN1-201ENST00000054950 IGHV1-2P23083 117 aa16.86■□□□□ 0.29
RCN1-201ENST00000054950 LURAP1Q96LR2 239 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms