RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 NQO2P16083 231 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 PJVKQ0ZLH3 352 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 POU2AF1Q16633 256 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 TMEM155Q4W5P6 130 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 LYG1Q8N1E2 194 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 LINC00311Q8N616 119 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 OR52E5Q8NH55 327 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 LINC00052Q96N35 136 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 ANKHD1Q8IWZ3 2542 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 A0A1W2PPE3 182 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 UMAD1C9J7I0 102 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 COL8A2P25067 703 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 ATP6V0CP27449 155 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 F2RL1P55085 397 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 ERVK-16P61578 105 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 HBG1P69891 147 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 HBG2P69892 147 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 FAM71F2Q6NXP2 309 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 ZNF833PQ6ZTB9 187 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 DTX2Q86UW9 622 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 TMEM217Q8N7C4 229 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 ZNF383Q8NA42 475 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 HSD17B11Q8NBQ5 300 aa11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 PARD6GQ9BYG4 376 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 TPRP12270 2363 aaKnown RBP11.74□□□□□ -0.53
RTFDC1-201ENST00000023939 ACACBO00763 2458 aa11.73□□□□□ -0.53
RTFDC1-201ENST00000023939 H3BP45 60 aa11.73□□□□□ -0.53
RTFDC1-201ENST00000023939 CCL3L1P16619 93 aa11.73□□□□□ -0.53
RTFDC1-201ENST00000023939 GNLYP22749 145 aa11.73□□□□□ -0.53
RTFDC1-201ENST00000023939 DHRS7BQ6IAN0 325 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-201ENST00000023939 HAPLN4Q86UW8 402 aa11.73□□□□□ -0.53
RTFDC1-201ENST00000023939 NEU4Q8WWR8 484 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-201ENST00000023939 H1FXQ92522 213 aaKnown RBP11.73□□□□□ -0.53
RTFDC1-201ENST00000023939 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
RTFDC1-201ENST00000023939 PKDREJQ9NTG1 2253 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 PPIHO43447 177 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 SCAF4O95104 1147 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 OR8U8P0C7N1 319 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 GNG10P50151 68 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 TAGLNQ01995 201 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 TMEM267Q0VDI3 215 aaPredicted RBP11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 Q6ZRG5 221 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 ZNF429Q86V71 674 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 COMMD1Q8N668 190 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 DTD1Q8TEA8 209 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 RALYQ9UKM9 306 aaKnown RBP11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 CHD8Q9HCK8 2581 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 IFNA5P01569 189 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 METTL15P1P0C7V9 234 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 CT45A6P0DMU7 189 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 CT45A5P0DMU8 189 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 CT45A7P0DMV0 189 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 UQCRFS1P47985 274 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 SPCS3P61009 180 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 RELBQ01201 579 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 TUSC1Q2TAM9 212 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 SPANXN5Q5MJ07 72 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 ZNF841Q6ZN19 808 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 HIPK2Q9H2X6 1198 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 HRH4Q9H3N8 390 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 TMEM140Q9NV12 185 aa11.72□□□□□ -0.53
RTFDC1-201ENST00000023939 IL6RP08887 468 aaPredicted RBP11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 ZNF137PP52743 207 aa11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 ATP6V1FQ16864 119 aa11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 C11orf42Q8N5U0 333 aa11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 BPIFCQ8NFQ6 507 aa11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 OR2G3Q8NGZ4 309 aa11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 C8orf46Q8TAG6 207 aa11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 OR4C12Q96R67 309 aa11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 QTRT1Q9BXR0 403 aaKnown RBP11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 NUP50Q9UKX7 468 aa11.71□□□□□ -0.54
RTFDC1-201ENST00000023939 PMS2P5A8MQ11 134 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 LYNX1G3V0Z9 82 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 CRYZL1O95825 349 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 HRASP01112 189 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 RBP4P02753 201 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 SOD3P08294 240 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 LYNX1P0DP58 116 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 RTL8BQ17RB0 113 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 DPPA3Q6W0C5 159 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 PUSL1Q8N0Z8 303 aaKnown RBP11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 OR4A16Q8NH70 328 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 TMEM186Q96B77 213 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 AIFM2Q9BRQ8 373 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 MIOXQ9UGB7 285 aa11.7□□□□□ -0.54
RTFDC1-201ENST00000023939 CEBPZOSA8MTT3 80 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 J3QR06 171 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 RBMXL2O75526 392 aaKnown RBP11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 IGHV1-8P0DP01 117 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 IGFBP2P18065 325 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 CAMLGP49069 296 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 ERVFRD-1P60508 538 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 GNB2P62879 340 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 LRRC75BQ2VPJ9 315 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 OR5AN1Q8NGI8 311 aa11.69□□□□□ -0.54
RTFDC1-201ENST00000023939 OR9G1Q8NH87 305 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms