RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rab9aQ9R0M6 201 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Igkv6-32A0A140T8N9 115 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 A0A286YDM5 308 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rhox7aA2A4F1 281 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 SiglechB7ZMQ6 332 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Slco5a1E9PVD9 850 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 A630073D07RikE9PWS6 100 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 CiartQ3TQ03 375 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm1527Q3V0P3 650 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ptpmt1Q66GT5 193 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 GcsamQ6RFH4 181 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 PirtQ8BFY0 135 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr992Q8VGC6 309 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Trav5-1A0A075B5Z7 114 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ighv6-5A0A0A6YWS9 119 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 1700025C18RikA2A580 89 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm9047B9EJX3 177 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Nxpe5E0CX47 564 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm15056F6ZR08 88 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ifna2P01573 190 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Zfp7Q3TFZ4 685 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gp49aQ61450 303 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ifna13Q80SU4 189 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr112Q8C0S2 320 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 AfmidQ8K4H1 305 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Q9CQ90 155 aa9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Nova1Q9JKN6 507 aaKnown RBP9.04□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr251E9Q891 316 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Vmn1r60G3UY47 300 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Hnf1aP22361 628 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Slc25a4P48962 298 aaKnown RBP9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Timm8bP62077 83 aaKnown RBP9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Slc39a7Q31125 476 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Sec11cQ9D8V7 192 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Sbf1Q6ZPE2 1867 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tex38A2A8T7 201 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Klri1B2KG20 248 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Klf9O35739 244 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 DffbO54788 344 aaKnown RBP9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Oprk1P33534 380 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ca10P61215 328 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ube2g1P62254 170 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Lyplal1Q3UFF7 239 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Slc46a1Q6PEM8 459 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Poc1bQ8BHD1 476 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Pla2g16Q8R3U1 162 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Dram2Q9CR48 267 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rbm24D3Z4I3 236 aaKnown RBP9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 P01915 264 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 SelenopP70274 380 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mib2Q8R516 973 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 S1pr3Q9Z0U9 378 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1326-ps1A0A140T8J7 311 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 BC024063A0A1W2P7G7 749 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Sult2a3D3Z1W5 285 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Cnih1O35372 144 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Cryba1P02525 198 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Zfp2P08043 459 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Igsf6P0C6B7 237 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Rps16P14131 146 aaKnown RBP9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Lclat1Q3UN02 376 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Thap4Q6P3Z3 569 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Mindy2Q6PDI6 601 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Parp11Q8CFF0 331 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 B3gnt8Q8R3I9 389 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Ifi27l2bQ8VC49 283 aa9.03□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1224-ps1A3KGY4 311 aa9.02□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Fam98cE9PYD1 344 aa9.02□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Tmem71Q149F5 287 aa9.02□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Arrdc5Q497K5 325 aa9.02□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1211Q7TR09 311 aa9.02□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 C1saQ8CG14 688 aa9.02□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Olfr1238Q8VG59 315 aa9.02□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Icam4Q9ERM2 262 aa9.02□□□□□ -0.96
Ccdc40-201ENSMUST00000035935 Gm45800A0A1B0GT24 152 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Vmn1r5B2RQT2 315 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Kcnk15B2RVL1 343 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Vstm2lQ6PDS0 220 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Sulf2Q8CFG0 875 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Vrk3Q8K3G5 453 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Znf385aQ8VD12 386 aaKnown RBP9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Olfr344Q8VFP9 309 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Tmem147Q9CQG6 224 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Olfr1274-psA0A1L1SQ02 309 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Gm13762A2ATG2 311 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Zfp362B1ASA5 418 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Olfr872E9PVW2 323 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Gpr33O88416 339 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 P01746 140 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Hist1h1aP43275 213 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Rbp4Q00724 201 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 StumQ0VBF8 141 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Klk1b21Q61759 261 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 PnlipQ6P8U6 465 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Plce1Q8K4S1 2282 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 MrgprfQ8VCJ6 343 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Olfr1298Q8VGE6 312 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Olfr346Q8VGJ7 309 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Olfr829Q8VGX1 321 aa9.02□□□□□ -0.97
Ccdc40-201ENSMUST00000035935 Abhd14aQ922Q6 247 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 62.4 ms