RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tmem126bQ9D1R1 230 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tbx21Q9JKD8 530 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1191-ps1A0A1L1STD5 311 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 9130019O22RikG3X941 543 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Mcpt8P43430 247 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr124Q8VGW6 315 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Suclg1Q9WUM5 346 aaKnown RBP8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Klf5Q9Z0Z7 446 aaKnown RBP8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tnrc6cQ3UHC0 1690 aaKnown RBP8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ccl22O88430 92 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 TspoP50637 169 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 ShbgP97497 403 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 ShbQ6PD21 503 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr876Q7TRE4 310 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem255aQ8BHW5 351 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Rps19bp1Q8C6B9 143 aaKnown RBP8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Fam162bQ9CX19 157 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Cyb5r3Q9DCN2 301 aaKnown RBP8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tcrg-V7A0A0A6YYE8 116 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 CideaO70302 217 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Lsm6P62313 80 aaKnown RBP8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Slc46a1Q6PEM8 459 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 GcsamQ6RFH4 181 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr960Q8VET5 316 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Bcdin3dQ91YP1 285 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem107Q9CPV0 140 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Togaram1Q6A070 1776 aaKnown RBP8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm21244J3QK38 227 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P01661 131 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P01662 111 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P01663 111 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm10644Q3TZG3 87 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Lyplal1Q3UFF7 239 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 NppcQ61839 126 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Zfp455Q7M6X9 461 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Fbxw26Q8BI58 466 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Nudt9Q8BVU5 350 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr822Q8VFU1 312 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr56Q8VGD6 315 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tm4sf4Q91XD3 202 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ear10Q923L6 156 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Sfxn4Q925N1 313 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gp2Q9D733 531 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Slc25a10Q9QZD8 287 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Bcl3Q9Z2F6 448 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ajap1A2ALI5 412 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 1810011H11RikE9PVZ2 95 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr905L7N1X5 310 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Cldn1O88551 211 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Hoxa1P09022 331 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ccl9P51670 122 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Znf48Q3US17 591 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ifna13Q80SU4 189 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 5530401A14RikQ9D3H9 131 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 C4bP01029 1738 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm15293D3YX02 93 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Fgf8P37237 268 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 HaaoQ78JT3 286 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Lpar6Q8BMC0 344 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 MepeQ8K4L6 441 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ankrd10Q99LW0 415 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem215A7E1Z1 235 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Nhlh1Q02576 133 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 SelenohQ3UQA7 116 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Zfp747Q8BHM7 422 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem183Q9JJB9 375 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gab2Q9Z1S8 665 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm4565A0A140LJ87 301 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 R3hdmlA2A5I3 253 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm6176J3QK59 301 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 CtgfP29268 348 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Siah2Q06986 325 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Fam160a2Q3U2I3 975 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm4567Q3UTA8 301 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm7534Q3UU21 679 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Vmn1r26Q8R2D7 339 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 MrgprfQ8VCJ6 343 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Mgst1Q91VS7 155 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Pam16Q9CQV1 125 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ethe1Q9DCM0 254 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm21746J3QMM6 180 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ascl4M0QW46 144 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Cryba1P02525 198 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 InmtP40936 264 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Rps23P62267 143 aaKnown RBP8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Hoxc4Q08624 264 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Treml4Q3LRV9 263 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Spem1Q5F289 310 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Mast2Q60592 1734 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ino80cQ8BHA0 191 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1368Q8VFG3 314 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm29049A0A087WSM5 227 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm13769A2ATW2 309 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Nlgn4lB0F2B4 945 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm21118J3QPK8 227 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 TertO70372 1122 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Dbx1P52950 335 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 AgrpP56473 131 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Nkain2Q4PNJ2 208 aa8.98□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm20909Q5FWB5 227 aa8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms