RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 CLCC1Q96S66 551 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 OR51J1Q9H342 316 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 PARP11Q9NR21 331 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 WSB1Q9Y6I7 421 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 NOTCH1P46531 2555 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
PHGDH-227ENST00000641811 TUSC2O75896 110 aa13.59□□□□□ -0.23
PHGDH-227ENST00000641811 IGF1P05019 195 aa13.59□□□□□ -0.23
PHGDH-227ENST00000641811 ELK1P19419 428 aa13.59□□□□□ -0.23
PHGDH-227ENST00000641811 NDPQ00604 133 aa13.59□□□□□ -0.23
PHGDH-227ENST00000641811 PDPNQ86YL7 162 aa13.59□□□□□ -0.23
PHGDH-227ENST00000641811 CLVS1Q8IUQ0 354 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-227ENST00000641811 BVESQ8NE79 360 aa13.59□□□□□ -0.23
PHGDH-227ENST00000641811 ACOT12Q8WYK0 555 aa13.59□□□□□ -0.23
PHGDH-227ENST00000641811 FLYWCH2Q96CP2 140 aaKnown RBP13.59□□□□□ -0.23
PHGDH-227ENST00000641811 RNF5Q99942 180 aa13.59□□□□□ -0.23
PHGDH-227ENST00000641811 METTL1Q9UBP6 276 aaKnown RBP13.59□□□□□ -0.23
PHGDH-227ENST00000641811 MRPS7Q9Y2R9 242 aaKnown RBP13.59□□□□□ -0.23
PHGDH-227ENST00000641811 LINC00473A8K010 186 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 G3V318 75 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 APOA1P02647 267 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 VDAC1P21796 283 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 FCGR2CP31995 323 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 DUTP33316 252 aaKnown RBP13.58□□□□□ -0.24
PHGDH-227ENST00000641811 CBX5P45973 191 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 THBS3P49746 956 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 RPL23AP62750 156 aaKnown RBP13.58□□□□□ -0.24
PHGDH-227ENST00000641811 CX3CL1P78423 397 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 CFHR3Q02985 330 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 SPCS2Q15005 226 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 TEX38Q6PEX7 206 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 C1QL4Q86Z23 238 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 ZNF645Q8N7E2 425 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 TSNAXQ99598 290 aaKnown RBP13.58□□□□□ -0.24
PHGDH-227ENST00000641811 IFT46Q9NQC8 304 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 TPSG1Q9NRR2 321 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 FBXO7Q9Y3I1 522 aa13.58□□□□□ -0.24
PHGDH-227ENST00000641811 SLC25A17O43808 307 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 IGLV2-14P01704 120 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 RPLP1P05386 114 aaKnown RBP13.57□□□□□ -0.24
PHGDH-227ENST00000641811 OR5H8P0DN80 308 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 PF4V1P10720 104 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 ZNF182P17025 639 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-227ENST00000641811 AADACP22760 399 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 PRSS3P35030 304 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 COMMD1Q8N668 190 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 OR5AP2Q8NGF4 316 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 DDB2Q92466 427 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 GON7Q9BXV9 100 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 NECAP2Q9NVZ3 263 aa13.57□□□□□ -0.24
PHGDH-227ENST00000641811 IGLV2-23P01705 113 aa13.56□□□□□ -0.24
PHGDH-227ENST00000641811 RPL30P62888 115 aaKnown RBP13.56□□□□□ -0.24
PHGDH-227ENST00000641811 MZT2AQ6P582 158 aa13.56□□□□□ -0.24
PHGDH-227ENST00000641811 SNX29P2Q8IUI4 249 aa13.56□□□□□ -0.24
PHGDH-227ENST00000641811 CMTM3Q96MX0 182 aa13.56□□□□□ -0.24
PHGDH-227ENST00000641811 GPHA2Q96T91 129 aa13.56□□□□□ -0.24
PHGDH-227ENST00000641811 ANAPC10Q9UM13 185 aa13.56□□□□□ -0.24
PHGDH-227ENST00000641811 RBMX2Q9Y388 322 aaKnown RBP13.56□□□□□ -0.24
PHGDH-227ENST00000641811 A3GALT2U3KPV4 340 aa13.56□□□□□ -0.24
PHGDH-227ENST00000641811 PLXNB1O43157 2135 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 TRAV41A0A0B4J266 112 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 SMIM31A0A1B0GVY4 71 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 SRRM4A7MD48 611 aaKnown RBP13.55□□□□□ -0.24
PHGDH-227ENST00000641811 NUDT19A8MXV4 375 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 FAM25AB3EWG3 89 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 FAM25CB3EWG5 89 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 FAM25GB3EWG6 89 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 G3V4G9 280 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 CA2P00918 260 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 IGHG4P01861 327 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 EGR2P11161 476 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-227ENST00000641811 PPIFP30405 207 aaKnown RBP13.55□□□□□ -0.24
PHGDH-227ENST00000641811 RPL5P46777 297 aaKnown RBP13.55□□□□□ -0.24
PHGDH-227ENST00000641811 TAGLNQ01995 201 aaKnown RBP13.55□□□□□ -0.24
PHGDH-227ENST00000641811 PJVKQ0ZLH3 352 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 FOXE3Q13461 319 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 CDK10Q15131 360 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 RTL8BQ17RB0 113 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 TMEM177Q53S58 311 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 OR2B11Q5JQS5 317 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-227ENST00000641811 ZNF660Q6AZW8 331 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-227ENST00000641811 C8orf86Q6ZUL3 223 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 KLHL30-AS1Q8NEE0 82 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 ABHD5Q8WTS1 349 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 SECTM1Q8WVN6 248 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 ADTRPQ96IZ2 230 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 HARBI1Q96MB7 349 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 FAM103A1Q9BTL3 118 aaKnown RBP13.55□□□□□ -0.24
PHGDH-227ENST00000641811 CCL28Q9NRJ3 127 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 ZNF580Q9UK33 172 aa13.55□□□□□ -0.24
PHGDH-227ENST00000641811 SHOXO15266 292 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 SLC22A5O76082 557 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 SPDEFO95238 335 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 CRYZL1O95825 349 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 PPYP01298 95 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 PMP2P02689 132 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 PF4P02776 101 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 CRYGBP07316 175 aa13.54□□□□□ -0.24
PHGDH-227ENST00000641811 ELANEP08246 267 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms