RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TRAV1-1A0A0B4J248 108 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 IGHV1-46P01743 117 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 SELENOVP59797 346 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 RAB2AP61019 212 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 TNFAIP6P98066 277 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-211ENST00000641213 SOHLH1Q5JUK2 328 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 CLDND2Q8NHS1 167 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 C14orf79Q96F83 325 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 LRFN3Q9BTN0 628 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 RNF7Q9UBF6 113 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 IL19Q9UHD0 177 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 ACACAQ13085 2346 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 TET2Q6N021 2002 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-211ENST00000641213 MARCH11A6NNE9 402 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 PRRG2O14669 202 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 ZG16O60844 167 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 SCAF4O95104 1147 aaKnown RBP14.16□□□□□ -0.14
PHGDH-211ENST00000641213 SRP19P09132 144 aaKnown RBP14.16□□□□□ -0.14
PHGDH-211ENST00000641213 SELLP14151 372 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 ZNF134P52741 427 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 ICAM4Q14773 271 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 ZNF506Q5JVG8 444 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 MRGPRGQ86SM5 289 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 CISD2Q8N5K1 135 aaKnown RBP14.16□□□□□ -0.14
PHGDH-211ENST00000641213 FAM216AQ8WUB2 273 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
PHGDH-211ENST00000641213 UBE2L5PA0A1B0GUS4 154 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 CRYBA1P05813 215 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 CGB3P0DN86 165 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 CGB7P0DN87 165 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 PAX6P26367 422 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 SERF2P84101 59 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 ASCL5Q7RTU5 278 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 ZNF561Q8N587 486 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 C15orf54Q8N8G6 183 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 DTD1Q8TEA8 209 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 ZDHHC16Q969W1 377 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 R3HDM4Q96D70 268 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 CALYQ9NYX4 217 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 ATMQ13315 3056 aa14.15□□□□□ -0.14
PHGDH-211ENST00000641213 ZNF726P1Q15940 193 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 AVPI1Q5T686 147 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 Q8NA96 180 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 TAF15Q92804 592 aaKnown RBP eCLIP14.14□□□□□ -0.15
PHGDH-211ENST00000641213 NCOR1P1Q9H4R4 102 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 OR6C3Q9NZP0 311 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 YLPM1P49750 1951 aaKnown RBP14.14□□□□□ -0.15
PHGDH-211ENST00000641213 PMS2P5A8MQ11 134 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 RBMXL2O75526 392 aaKnown RBP14.14□□□□□ -0.15
PHGDH-211ENST00000641213 IGHV3-7P01780 117 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 CD55P08174 381 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 DAOP14920 347 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 RHEBQ15382 184 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 C17orf58Q2M2W7 97 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 NUP37Q8NFH4 326 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 SDSLQ96GA7 329 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 IFI27L2Q9H2X8 130 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 PRELID3BQ9Y3B1 194 aa14.14□□□□□ -0.15
PHGDH-211ENST00000641213 BSNQ9UPA5 3926 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 M0R1X1 148 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 FCGR3BO75015 233 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 CYB5R3P00387 301 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-211ENST00000641213 HSPB1P04792 205 aaKnown RBP14.13□□□□□ -0.15
PHGDH-211ENST00000641213 FBP1P09467 338 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 RPL39P5Q59GN2 51 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 UTF1Q5T230 341 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 STUMQ69YW2 141 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 DUX4L9Q6RFH8 374 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-211ENST00000641213 SSX7Q7RTT5 188 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 MBD3L1Q8WWY6 194 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 CIB3Q96Q77 187 aaPredicted RBP14.13□□□□□ -0.15
PHGDH-211ENST00000641213 UNKLQ9H9P5 680 aaKnown RBP14.13□□□□□ -0.15
PHGDH-211ENST00000641213 PUS1Q9Y606 427 aaKnown RBP eCLIP14.13□□□□□ -0.15
PHGDH-211ENST00000641213 APC2O95996 2303 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 C16orf97H3BN30 126 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 HPRT1P00492 218 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 OR9G9P0C7N8 305 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 ATP6V1FQ16864 119 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 TMEM41BQ5BJD5 291 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 SPINK9Q5DT21 86 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 TMEM108Q6UXF1 575 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 RCC1LQ96I51 464 aaKnown RBP14.13□□□□□ -0.15
PHGDH-211ENST00000641213 EGLN1Q9GZT9 426 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 TUBA4BQ9H853 241 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 ELOVL5Q9NYP7 299 aa14.13□□□□□ -0.15
PHGDH-211ENST00000641213 LOC102723971A0A1B0GUV8 181 aa14.12□□□□□ -0.15
PHGDH-211ENST00000641213 SLC31A2O15432 143 aa14.12□□□□□ -0.15
PHGDH-211ENST00000641213 TNFSF4P23510 183 aa14.12□□□□□ -0.15
PHGDH-211ENST00000641213 KHDC3LQ587J8 217 aa14.12□□□□□ -0.15
PHGDH-211ENST00000641213 Q8TCH9 128 aa14.12□□□□□ -0.15
PHGDH-211ENST00000641213 QTRT1Q9BXR0 403 aaKnown RBP14.12□□□□□ -0.15
PHGDH-211ENST00000641213 TIMM9Q9Y5J7 89 aa14.12□□□□□ -0.15
PHGDH-211ENST00000641213 MAP1BP46821 2468 aaKnown RBP14.12□□□□□ -0.15
PHGDH-211ENST00000641213 CEBPZOSA8MTT3 80 aa14.11□□□□□ -0.15
PHGDH-211ENST00000641213 FOXC1Q12948 553 aa14.11□□□□□ -0.15
PHGDH-211ENST00000641213 ZNF787Q6DD87 383 aa14.11□□□□□ -0.15
PHGDH-211ENST00000641213 LCN15Q6UWW0 184 aa14.11□□□□□ -0.15
PHGDH-211ENST00000641213 GFRALQ6UXV0 394 aa14.11□□□□□ -0.15
PHGDH-211ENST00000641213 CENPVQ7Z7K6 275 aaPredicted RBP14.11□□□□□ -0.15
PHGDH-211ENST00000641213 WFDC8Q8IUA0 241 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms