RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 PSG5Q15238 335 aa11.2□□□□□ -0.62
HNRNPU-229ENST00000640440 C19orf54Q5BKX5 351 aa11.2□□□□□ -0.62
HNRNPU-229ENST00000640440 OR10J5Q8NHC4 309 aa11.2□□□□□ -0.62
HNRNPU-229ENST00000640440 CASTOR1Q8WTX7 329 aa11.2□□□□□ -0.62
HNRNPU-229ENST00000640440 RNF5Q99942 180 aa11.2□□□□□ -0.62
HNRNPU-229ENST00000640440 FAM103A1Q9BTL3 118 aaKnown RBP11.2□□□□□ -0.62
HNRNPU-229ENST00000640440 OR2D2Q9H210 308 aa11.2□□□□□ -0.62
HNRNPU-229ENST00000640440 FOXA2Q9Y261 457 aaPredicted RBP11.2□□□□□ -0.62
HNRNPU-229ENST00000640440 I3L521 148 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 SOX15O60248 233 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 CA2P00918 260 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 OR8U9P0C7N5 309 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 C9orf66Q5T8R8 295 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 PPP1R27Q86WC6 154 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 PDPNQ86YL7 162 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 TCTEX1D1Q8N7M0 179 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 OR1N2Q8NGR9 330 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 TSNAXQ99598 290 aaKnown RBP11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 TOLLIPQ9H0E2 274 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 ALX4Q9H161 411 aaPredicted RBP11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 ATG5Q9H1Y0 275 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 TPSG1Q9NRR2 321 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 SLC35D1Q9NTN3 355 aa11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 TXNL4BQ9NX01 149 aaKnown RBP11.19□□□□□ -0.62
HNRNPU-229ENST00000640440 TRBV6-7A0A0A0MS04 114 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 SLC25A17O43808 307 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 SPDEFO95238 335 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 OR8U8P0C7N1 319 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 EGR2P11161 476 aaPredicted RBP11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 TALDO1P37837 337 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 RUNX1Q01196 453 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 ZNF616Q08AN1 781 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 TMEM267Q0VDI3 215 aaPredicted RBP11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 ACTBL2Q562R1 376 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 GRPEL2Q8TAA5 225 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 C5orf30Q96GV9 206 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 GINS4Q9BRT9 223 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 SDHAF2Q9NX18 166 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 ZMAT5Q9UDW3 170 aaKnown RBP11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 STUB1Q9UNE7 303 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 NUBP2Q9Y5Y2 271 aa11.18□□□□□ -0.62
HNRNPU-229ENST00000640440 IGKV1D-8A0A087WSZ0 117 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 NOTOA8MTQ0 251 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 DIRAS3O95661 229 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 FGF9P31371 208 aaPredicted RBP11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 ECI1P42126 302 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 CD69Q07108 199 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 NEDD8Q15843 81 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 C11orf87Q6NUJ2 197 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 ZNF562Q6V9R5 426 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 LFNGQ8NES3 379 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 ARPC1AQ92747 370 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 FLYWCH2Q96CP2 140 aaKnown RBP11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 PRR25Q96S07 402 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 ELF5Q9UKW6 265 aaPredicted RBP11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 RBM7Q9Y580 266 aaKnown RBP11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 STAB2Q8WWQ8 2551 aa11.17□□□□□ -0.62
HNRNPU-229ENST00000640440 RAMP3O60896 148 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 SMIM18P0DKX4 95 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 DCTN2Q13561 401 aaKnown RBP11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 FXYD3Q14802 87 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 HARBI1Q96MB7 349 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 MS4A10Q96PG2 267 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 OR51E2Q9H255 320 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 VCX3AQ9NNX9 186 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 DAPK2Q9UIK4 370 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 SCOCQ9UIL1 159 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 SSR3Q9UNL2 185 aa11.16□□□□□ -0.62
HNRNPU-229ENST00000640440 TENM3Q9P273 2699 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 ARPC1BO15143 372 aaKnown RBP11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 IGLV2-23P01705 113 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 IGHV3-11P01762 117 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 LGALS1P09382 135 aaKnown RBP11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 DTYMKP23919 212 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 SLURP1P55000 103 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 TPPP2P59282 170 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 CBX3Q13185 183 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 ARL6IP1Q15041 203 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 CDNFQ49AH0 187 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 AKIRIN2Q53H80 203 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 PYHIN1Q6K0P9 492 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 SFXN4Q6P4A7 337 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 Q6ZS49 121 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 TPRA1Q86W33 373 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 H1FOOQ8IZA3 346 aaPredicted RBP11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 LGALS14Q8TCE9 139 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 NUDCD2Q8WVJ2 157 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 DCUN1D4Q92564 292 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 B9D2Q9BPU9 175 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.15□□□□□ -0.62
HNRNPU-229ENST00000640440 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
HNRNPU-229ENST00000640440 A0A087WW49 117 aa11.14□□□□□ -0.63
HNRNPU-229ENST00000640440 TMEM235A6NFC5 223 aa11.14□□□□□ -0.63
HNRNPU-229ENST00000640440 LINC01619G3V211 115 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms