RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 OR5B12Q96R08 314 aa12.27□□□□□ -0.45
SCARB2-221ENST00000640341 KLF13Q9Y2Y9 288 aaPredicted RBP12.27□□□□□ -0.45
SCARB2-221ENST00000640341 PHOX2AO14813 284 aa12.27□□□□□ -0.45
SCARB2-221ENST00000640341 CD46P15529 392 aa12.27□□□□□ -0.45
SCARB2-221ENST00000640341 EDDM3BP56851 147 aa12.27□□□□□ -0.45
SCARB2-221ENST00000640341 SERF2P84101 59 aa12.27□□□□□ -0.45
SCARB2-221ENST00000640341 BSXQ3C1V8 233 aa12.27□□□□□ -0.45
SCARB2-221ENST00000640341 PCGF1Q9BSM1 259 aa12.27□□□□□ -0.45
SCARB2-221ENST00000640341 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-221ENST00000640341 PNRC1Q12796 327 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-221ENST00000640341 ZNF66Q6ZN08 573 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 ZNF600Q6ZNG1 722 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 LURAP1LQ8IV03 231 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 PARLQ9H300 379 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 WASF3Q9UPY6 502 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 MGAQ8IWI9 3026 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 SMG1Q96Q15 3661 aaKnown RBP12.26□□□□□ -0.45
SCARB2-221ENST00000640341 TRAV38-1A0A0B4J264 116 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 TIMM8AO60220 97 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-221ENST00000640341 SS18L1O75177 396 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-221ENST00000640341 MAS1LP35410 378 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 MSMO1Q15800 293 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 GTF3AQ92664 365 aaKnown RBP12.26□□□□□ -0.45
SCARB2-221ENST00000640341 DMRT1Q9Y5R6 373 aa12.26□□□□□ -0.45
SCARB2-221ENST00000640341 TPRP12270 2363 aaKnown RBP12.26□□□□□ -0.45
SCARB2-221ENST00000640341 C1QTNF9BB2RNN3 333 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 TDGF1P13385 188 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 HOXC12P31275 282 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 GALR1P47211 349 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 OR10A7Q8NGE5 316 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 KLF14Q8TD94 323 aaPredicted RBP12.25□□□□□ -0.45
SCARB2-221ENST00000640341 RAB24Q969Q5 203 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
SCARB2-221ENST00000640341 POM121Q96HA1 1249 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 PATZ1Q9HBE1 687 aaKnown RBP12.25□□□□□ -0.45
SCARB2-221ENST00000640341 TMEM30CPA0ZSE6 113 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 PGPEP1LA6NFU8 196 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 PCNX2A6NKB5 2137 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 B4DEV8 164 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 PPP5D1E7EU14 171 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 COL8A2P25067 703 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 FAM3BP58499 235 aaPredicted RBP12.25□□□□□ -0.45
SCARB2-221ENST00000640341 TGFBR3Q03167 851 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 Q6ZR03 302 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 MOB1BQ7L9L4 216 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 OR4X1Q8NH49 305 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 MBD3L1Q8WWY6 194 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 DUSP13Q9UII6 198 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 TRAV1-1A0A0B4J248 108 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 RNF212BA8MTL3 300 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 IGHV1-2P23083 117 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 HOXA6P31267 233 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 CATR1Q13166 79 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 ZNF766Q5HY98 468 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 C5orf30Q96GV9 206 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 MEGF10Q96KG7 1140 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 PSMG3Q9BT73 122 aaPredicted RBP12.25□□□□□ -0.45
SCARB2-221ENST00000640341 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.25□□□□□ -0.45
SCARB2-221ENST00000640341 NAT8Q9UHE5 227 aa12.25□□□□□ -0.45
SCARB2-221ENST00000640341 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 LRRC30A6NM36 301 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 IFNA10P01566 189 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 COL10A1Q03692 680 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 PRSS8Q16651 343 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 UNQ6494/PRO21346Q6UXR6 183 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 ZNF645Q8N7E2 425 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 ZPBPQ9BS86 351 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 FCGR3BO75015 233 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 PTBP3O95758 552 aaKnown RBP12.24□□□□□ -0.45
SCARB2-221ENST00000640341 OPN1MWP04001 364 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 OPN1MW2P0DN77 364 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 OPN1MW3P0DN78 364 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 SLC25A6P12236 298 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 CCL11P51671 97 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 P2RY6Q15077 328 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 GNG12Q9UBI6 72 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 FUT9Q9Y231 359 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 LINC00473A8K010 186 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 RPL23P62829 140 aaKnown RBP12.24□□□□□ -0.45
SCARB2-221ENST00000640341 SP5Q6BEB4 398 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-221ENST00000640341 Q8IYB0 196 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 OR13A1Q8NGR1 328 aa12.24□□□□□ -0.45
SCARB2-221ENST00000640341 XKRY2A2RUG3 117 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 GZMHP20718 246 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 HIST1H2BLQ99880 126 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 HINT2Q9BX68 163 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 TREM2Q9NZC2 230 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 MLNRO43193 412 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 COX5AP20674 150 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 SOX8P57073 446 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 SRSF6Q13247 344 aaKnown RBP12.23□□□□□ -0.45
SCARB2-221ENST00000640341 VHLLQ6RSH7 139 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 LEAP2Q969E1 77 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 ZNF729A6NN14 1252 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-221ENST00000640341 TMEM147Q9BVK8 224 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 GPR87Q9BY21 358 aa12.23□□□□□ -0.45
SCARB2-221ENST00000640341 ERVK11-1P61568 191 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 TMEM14EPQ6UXP3 125 aa12.22□□□□□ -0.45
SCARB2-221ENST00000640341 COQ2Q96H96 371 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms