RNA–Protein interactions for RNA: ENST00000640313.1

VPS35-212, Transcript of VPS35, retromer complex component, humanhuman

TSL 5 BASIC

Gene VPS35, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-212ENST00000640313 OR2D3Q8NGH3 330 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 OR51T1Q8NGJ9 327 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 OR6K2Q8NGY2 324 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 OR5J2Q8NH18 312 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 OR51H1Q8NH63 302 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 RPS4Y2Q8TD47 263 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 DTD1Q8TEA8 209 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 MITD1Q8WV92 249 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 TNFAIP8L1Q8WVP5 186 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 SLC7A6Q92536 515 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 RORBQ92753 470 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 PPWD1Q96BP3 646 aaKnown RBP-0.09□□□□□ -2.42
VPS35-212ENST00000640313 MRAP2Q96G30 205 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 ACY3Q96HD9 319 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 SFRP2Q96HF1 295 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 GLT1D1Q96MS3 346 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 IMMP2LQ96T52 175 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 MYCBPQ99417 103 aaPredicted RBP-0.09□□□□□ -2.42
VPS35-212ENST00000640313 CIB1Q99828 191 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 EBNA1BP2Q99848 306 aaKnown RBP-0.09□□□□□ -2.42
VPS35-212ENST00000640313 APOL4Q9BPW4 351 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 MND1Q9BWT6 205 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 SPRR2GQ9BYE4 73 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 REG4Q9BYZ8 158 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 TTTY13Q9BZ97 58 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 BCL2L14Q9BZR8 327 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 MED28Q9H204 178 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 NCOR1P1Q9H4R4 102 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 RPRD1BQ9NQG5 326 aaKnown RBP-0.09□□□□□ -2.42
VPS35-212ENST00000640313 SLC2A9Q9NRM0 540 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 UBQLN4Q9NRR5 601 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 DMAC2Q9NW81 257 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 SNX12Q9UMY4 172 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 POFUT2Q9Y2G5 429 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 FIS1Q9Y3D6 152 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 POLR3HQ9Y535 204 aaPredicted RBP-0.09□□□□□ -2.42
VPS35-212ENST00000640313 NCOR2Q9Y618 2525 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 LAMB4A4D0S4 1761 aa-0.09□□□□□ -2.42
VPS35-212ENST00000640313 SCAF11Q99590 1463 aaKnown RBP-0.1□□□□□ -2.42
VPS35-212ENST00000640313 MED12LQ86YW9 2145 aa-0.1□□□□□ -2.42
VPS35-212ENST00000640313 TPRP12270 2363 aaKnown RBP-0.1□□□□□ -2.42
VPS35-212ENST00000640313 ZNF638Q14966 1978 aaKnown RBP-0.1□□□□□ -2.42
VPS35-212ENST00000640313 UNC79Q9P2D8 2635 aa-0.1□□□□□ -2.42
VPS35-212ENST00000640313 TNCP24821 2201 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 SLX4Q8IY92 1834 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 NPATQ14207 1427 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 MEIKINA0A087WXM9 373 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 IGKV2D-26A0A0A0MRZ7 120 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 A0A0D9SG42 100 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 GOLGA8QA0A0J9YX86 632 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 IRGMA1A4Y4 181 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 OR6C6A6NF89 314 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 HMSDA8MTL9 139 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 F5H5K5 113 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 H7C2G1 150 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 GOLGA8RI6L899 631 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 M0QYV0 167 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 M0R381 172 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 MRASO14807 208 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 GEMIN2O14893 280 aaKnown RBP-0.1□□□□□ -2.43
VPS35-212ENST00000640313 SGCEO43556 437 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 MPZL2O60487 215 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 UGT2B11O75310 529 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 STK16O75716 305 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 OTCP00480 354 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 ASS1P00966 412 aaKnown RBP-0.1□□□□□ -2.43
VPS35-212ENST00000640313 CST4P01036 141 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 CSTAP01040 98 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 CLPSP04118 112 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 ATP5G1P05496 136 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 BPGMP07738 259 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 LGALS1P09382 135 aaKnown RBP-0.1□□□□□ -2.43
VPS35-212ENST00000640313 UCHL1P09936 223 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 TFPTP0C1Z6 253 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 SLC35E2BP0CK96 405 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 STAG3L2P0CL84 134 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 LIMS3P0CW19 117 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 LIMS4P0CW20 117 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 ORM2P19652 201 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 GADD45AP24522 165 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 AGTR1P30556 359 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 LCN1P31025 176 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 CCR7P32248 378 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 CA7P43166 264 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 GABRA2P47869 451 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 PSMD7P51665 324 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 TAS2R45P59539 299 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 RAB14P61106 215 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 TMEM258P61165 79 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 DAD1P61803 113 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 CNBPP62633 177 aaKnown RBP-0.1□□□□□ -2.43
VPS35-212ENST00000640313 FKBP1AP62942 108 aaKnown RBP-0.1□□□□□ -2.43
VPS35-212ENST00000640313 HERVK_113P63121 156 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 TNFAIP6P98066 277 aaPredicted RBP-0.1□□□□□ -2.43
VPS35-212ENST00000640313 EMX1Q04741 257 aaPredicted RBP-0.1□□□□□ -2.43
VPS35-212ENST00000640313 TMEM267Q0VDI3 215 aaPredicted RBP-0.1□□□□□ -2.43
VPS35-212ENST00000640313 ZNF846Q147U1 533 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 VAMP3Q15836 100 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 MIAQ16674 131 aa-0.1□□□□□ -2.43
VPS35-212ENST00000640313 C4orf26Q17RF5 130 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms