RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 A0A1W2PRF3 423 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 A0A1W2PRM7 423 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 DBX1A6NMT0 343 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 H0Y980 276 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 FSHBP01225 129 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 IFNA2P01563 188 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 VAMP1P23763 118 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 UCP1P25874 307 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 HTR1DP28221 377 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 ZNF816Q0VGE8 651 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-219ENST00000639738 TPTE2P1Q5T6R2 138 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 DYNAPQ8N1N2 210 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 OR51H1Q8NH63 302 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 LHFPL5Q8TAF8 219 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 C17orf50Q8WW18 174 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 NABP2Q9BQ15 211 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 TMUB1Q9BVT8 246 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 MRPL20Q9BYC9 149 aaKnown RBP16.83■□□□□ 0.28
SCARB2-219ENST00000639738 TMEM222Q9H0R3 208 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 GPN1Q9HCN4 374 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-219ENST00000639738 DPM3Q9P2X0 92 aa16.83■□□□□ 0.28
SCARB2-219ENST00000639738 AMMECR1Q9Y4X0 333 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-219ENST00000639738 A0A0B4J2A0 478 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 IGHV1-69DA0A0B4J2H0 117 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 IGHV1-69P01742 117 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 IGHV4-38-2P0DP08 117 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 CBX3Q13185 183 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 MINOS1Q5TGZ0 78 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 LRTM2Q8N967 370 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 TMEM56Q96MV1 263 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 FAM212BQ9NTI7 297 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-219ENST00000639738 SHPKQ9UHJ6 478 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 KCNIP3Q9Y2W7 256 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 MINOS1-NBL1R4GNA1 71 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 TMEM56-RWDD3S4R434 201 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 TLN2Q9Y4G6 2542 aa16.82■□□□□ 0.28
SCARB2-219ENST00000639738 hCG_2014768A0A024R1R8 64 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 LEUTXA8MZ59 168 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 CREBL2O60519 120 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-219ENST00000639738 CDS2O95674 445 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 IGKV1-39P01597 117 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 IGKV1D-39P04432 117 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 CD99P14209 185 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 IL3RAP26951 378 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 S100GP29377 79 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 REG1BP48304 166 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 THBS3P49746 956 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 C2orf68Q2NKX9 166 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 MIDNQ504T8 468 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 C12orf45Q8N5I9 185 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-219ENST00000639738 OR5AN1Q8NGI8 311 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 CASTOR1Q8WTX7 329 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 CHAC2Q8WUX2 184 aa16.81■□□□□ 0.28
SCARB2-219ENST00000639738 RBMXL1Q96E39 390 aaKnown RBP16.81■□□□□ 0.28
SCARB2-219ENST00000639738 TBL2Q9Y4P3 447 aaKnown RBP16.81■□□□□ 0.28
SCARB2-219ENST00000639738 NIPBLQ6KC79 2804 aaeCLIP16.81■□□□□ 0.28
SCARB2-219ENST00000639738 A0A1W2PPI3 338 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 RNF212BA8MTL3 300 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 A8MV72 311 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-219ENST00000639738 NPFFO15130 113 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 RAMP3O60896 148 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 B3GALNT1O75752 331 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 LIAT1Q6ZQX7 453 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 TCTEX1D1Q8N7M0 179 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 ADTRPQ96IZ2 230 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 LIN7CQ9NUP9 197 aaKnown RBP16.8■□□□□ 0.28
SCARB2-219ENST00000639738 TRAV40A0A0B4J280 105 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 GAPDHP04406 335 aaKnown RBP16.8■□□□□ 0.28
SCARB2-219ENST00000639738 SAA4P35542 130 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 BCAP31P51572 246 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 CATR1Q13166 79 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 HABP2Q14520 560 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-219ENST00000639738 LIN54Q6MZP7 749 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 TGIF2LXQ8IUE1 241 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 TCTEX1D2Q8WW35 142 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 C18orf12Q96KH6 178 aa16.8■□□□□ 0.28
SCARB2-219ENST00000639738 IGHV1-3A0A0C4DH29 117 aa16.79■□□□□ 0.28
SCARB2-219ENST00000639738 H0YJW9 148 aa16.79■□□□□ 0.28
SCARB2-219ENST00000639738 RBFOX2O43251 390 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCARB2-219ENST00000639738 RUSC1-AS1Q66K80 236 aa16.79■□□□□ 0.28
SCARB2-219ENST00000639738 SELENOHQ8IZQ5 122 aaKnown RBP16.79■□□□□ 0.28
SCARB2-219ENST00000639738 SPAG16Q8N0X2 631 aa16.79■□□□□ 0.28
SCARB2-219ENST00000639738 CFHR4Q92496 578 aa16.79■□□□□ 0.28
SCARB2-219ENST00000639738 MXRA5Q9NR99 2828 aa16.79■□□□□ 0.28
SCARB2-219ENST00000639738 IGHV3OR16-10A0A075B7F0 116 aa16.78■□□□□ 0.28
SCARB2-219ENST00000639738 CD5LO43866 347 aa16.78■□□□□ 0.28
SCARB2-219ENST00000639738 SULT1A3P0DMM9 295 aa16.78■□□□□ 0.28
SCARB2-219ENST00000639738 SULT1A4P0DMN0 295 aa16.78■□□□□ 0.28
SCARB2-219ENST00000639738 HLA-GP17693 338 aa16.78■□□□□ 0.28
SCARB2-219ENST00000639738 PAX6P26367 422 aa16.78■□□□□ 0.28
SCARB2-219ENST00000639738 RRAS2P62070 204 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-219ENST00000639738 OR2B11Q5JQS5 317 aa16.78■□□□□ 0.28
SCARB2-219ENST00000639738 MALSU1Q96EH3 234 aa16.78■□□□□ 0.28
SCARB2-219ENST00000639738 PHB2Q99623 299 aa16.78■□□□□ 0.28
SCARB2-219ENST00000639738 OOSP1A8MZH6 123 aa16.77■□□□□ 0.28
SCARB2-219ENST00000639738 TXNL1O43396 289 aa16.77■□□□□ 0.28
SCARB2-219ENST00000639738 ANXA3P12429 323 aa16.77■□□□□ 0.28
SCARB2-219ENST00000639738 CEACAM3P40198 252 aa16.77■□□□□ 0.28
SCARB2-219ENST00000639738 LPAR6P43657 344 aa16.77■□□□□ 0.28
SCARB2-219ENST00000639738 FCN2Q15485 313 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms