RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 MDS2Q8NDY4 140 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 WDYHV1Q96HA8 205 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 NPCDR1Q9BY65 106 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 HRASP01112 189 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 ERVS71-1P61550 626 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 ZNF709Q8N972 641 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 NECAP1Q8NC96 275 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 SLC25A40Q8TBP6 338 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 NINJ1Q92982 152 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 ACY3Q96HD9 319 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 C1QTNF9BB2RNN3 333 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 ZG16O60844 167 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 HBZP02008 142 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 ZNF883P0CG24 379 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 CEBPDP49716 269 aaPredicted RBP16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 PDLIM4P50479 330 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 FAM3BP58499 235 aaPredicted RBP16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 ALKBH6Q3KRA9 238 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 OR52L2PQ8NGH6 319 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 XKRY2A2RUG3 117 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 VENTXO95231 258 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 GCGP01275 180 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 NDUFB7P17568 137 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 IDH3GP51553 393 aaPredicted RBP16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 UBE2NP61088 152 aaKnown RBP16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 TMEM164Q5U3C3 297 aa16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 NEIL1Q96FI4 390 aaPredicted RBP16.86■□□□□ 0.29
SYNGAP1-227ENST00000638142 KIAA2026Q5HYC2 2103 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 C17orf98A8MV24 154 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 TUBG1P23258 451 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 BRWD1-AS2P59051 145 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 TFF3Q07654 80 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 C1orf210Q8IVY1 113 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 DMRTC2Q8IXT2 367 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 TAAR6Q96RI8 345 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 AHCTF1Q8WYP5 2266 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 IGHV3-64DA0A0J9YX35 117 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 C17orf112F2Z3M2 114 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 SELLP14151 372 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 GZMHP20718 246 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 TGFBR3Q03167 851 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 PSG7Q13046 419 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 H2BFWTQ7Z2G1 175 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 ZNF664Q8N3J9 261 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 BEND2Q8NDZ0 799 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 TMEM170AQ8WVE7 144 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 TP53TG5Q9Y2B4 290 aa16.85■□□□□ 0.29
SYNGAP1-227ENST00000638142 GNB2P62879 340 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 GATAD1Q8WUU5 269 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 ZDHHC16Q969W1 377 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 NDUFAF3Q9BU61 184 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 DEFB127Q9H1M4 99 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 C19orf67A6NJJ6 358 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 GYPAP02724 150 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 MPLP40238 635 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 TLE1Q04724 770 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 AESQ08117 197 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 ZNF66Q6ZN08 573 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 MISP3Q96FF7 219 aa16.84■□□□□ 0.29
SYNGAP1-227ENST00000638142 TRGV5A0A0B4J1U4 118 aa16.83■□□□□ 0.28
SYNGAP1-227ENST00000638142 A0A1W2PNU3 283 aaPredicted RBP16.83■□□□□ 0.28
SYNGAP1-227ENST00000638142 PAGE4O60829 102 aa16.83■□□□□ 0.28
SYNGAP1-227ENST00000638142 CD46P15529 392 aa16.83■□□□□ 0.28
SYNGAP1-227ENST00000638142 SRP14P37108 136 aaKnown RBP16.83■□□□□ 0.28
SYNGAP1-227ENST00000638142 LPAL2Q16609 132 aa16.83■□□□□ 0.28
SYNGAP1-227ENST00000638142 GMPPAQ96IJ6 420 aaPredicted RBP16.83■□□□□ 0.28
SYNGAP1-227ENST00000638142 PCGF1Q9BSM1 259 aa16.83■□□□□ 0.28
SYNGAP1-227ENST00000638142 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 GGCTO75223 188 aaKnown RBP16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 PLA2G5P39877 138 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 RTP5Q14D33 572 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 ACOT6Q3I5F7 207 aaPredicted RBP16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 PRR7Q8TB68 274 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 COQ2Q96H96 371 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 DIRC2Q96SL1 478 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 ELOVL1Q9BW60 279 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 OBP2BQ9NPH6 170 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 SPRR3Q9UBC9 169 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 RBMXL2O75526 392 aaKnown RBP16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 PMP22Q01453 160 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 P2RY6Q15077 328 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 SSX2Q16385 188 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 FAM53AQ6NSI3 398 aaPredicted RBP16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 WDR31Q8NA23 367 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 OR2T10Q8NGZ9 312 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 FAM186AA6NE01 2351 aa16.82■□□□□ 0.28
SYNGAP1-227ENST00000638142 A0A1W2PPQ1 181 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 ZNF891A8MT65 544 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 TYMSP04818 313 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 DMDP11532 3685 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 GABRA2P47869 451 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 CDC34P49427 236 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 NUBP1P53384 320 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 BTNL3Q6UXE8 466 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 HSD17B10Q99714 261 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 WNT9BO14905 357 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 IGHV1-2P23083 117 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 ACTL10Q5JWF8 245 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 C11orf53Q8IXP5 236 aa16.81■□□□□ 0.28
SYNGAP1-227ENST00000638142 KLF14Q8TD94 323 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms