RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 Q6ZS49 121 aa10.8□□□□□ -0.68
PNKP-228ENST00000637325 RAX2Q96IS3 184 aa10.8□□□□□ -0.68
PNKP-228ENST00000637325 P2RX4Q99571 388 aa10.8□□□□□ -0.68
PNKP-228ENST00000637325 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.8□□□□□ -0.68
PNKP-228ENST00000637325 RHBDL2Q9NX52 303 aa10.8□□□□□ -0.68
PNKP-228ENST00000637325 ELF5Q9UKW6 265 aaPredicted RBP10.8□□□□□ -0.68
PNKP-228ENST00000637325 GAB2Q9UQC2 676 aa10.8□□□□□ -0.68
PNKP-228ENST00000637325 A3GALT2U3KPV4 340 aa10.8□□□□□ -0.68
PNKP-228ENST00000637325 A0A087WXM4 84 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 TMEM235A6NFC5 223 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 PPIFP30405 207 aaKnown RBP10.79□□□□□ -0.68
PNKP-228ENST00000637325 CX3CL1P78423 397 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 PSG5Q15238 335 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 TIMM50Q3ZCQ8 353 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 NUDCD2Q8WVJ2 157 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 C4orf3Q8WVX3 66 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 SDHAF2Q9NX18 166 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 ETV7Q9Y603 341 aa10.79□□□□□ -0.68
PNKP-228ENST00000637325 IGKV1D-8A0A087WSZ0 117 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 A0A1W2PN81 502 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 J3QRK9 145 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 FCN1O00602 326 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 SPDEFO95238 335 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 IGKV1-16P04430 117 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 CTXN2P0C2S0 81 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 CHRNA7P36544 502 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 SCAND1P57086 179 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 TAGLNQ01995 201 aaKnown RBP10.78□□□□□ -0.68
PNKP-228ENST00000637325 PPP1R27Q86WC6 154 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 H1FOOQ8IZA3 346 aaPredicted RBP10.78□□□□□ -0.68
PNKP-228ENST00000637325 TSPAN14Q8NG11 270 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 DCSTAMPQ9H295 470 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 KLK15Q9H2R5 256 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 VSIG4Q9Y279 399 aa10.78□□□□□ -0.68
PNKP-228ENST00000637325 TRAV18A0A075B6X5 111 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 SLC25A17O43808 307 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 AIREO43918 545 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 TNFAIP8O95379 198 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 CNIH1O95406 144 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 CA2P00918 260 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 RRASP10301 218 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 CD40LGP29965 261 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 HOXD3P31249 432 aaPredicted RBP10.77□□□□□ -0.69
PNKP-228ENST00000637325 LGALS7P47929 136 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 RAB9AP51151 201 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 NDPQ00604 133 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 RTL8BQ17RB0 113 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 ZNF260Q3ZCT1 412 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 UNQ5815/PRO19632Q6UWF5 114 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 ZNF562Q6V9R5 426 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 TCTEX1D1Q8N7M0 179 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 ZNF491Q8N8L2 437 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 MINDY2Q8NBR6 621 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 BVESQ8NE79 360 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 OR5M8Q8NGP6 311 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 OR5H6Q8NGV6 325 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 ADTRPQ96IZ2 230 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 HARBI1Q96MB7 349 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 DIABLOQ9NR28 239 aa10.77□□□□□ -0.69
PNKP-228ENST00000637325 FOXA2Q9Y261 457 aaPredicted RBP10.77□□□□□ -0.69
PNKP-228ENST00000637325 SHOXO15266 292 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 IGLV1-40P01703 118 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 LUMP51884 338 aaPredicted RBP10.76□□□□□ -0.69
PNKP-228ENST00000637325 GNB1P62873 340 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 ACTBL2Q562R1 376 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 CNIH2Q6PI25 160 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 CROCCP3Q8IVE0 287 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 OR11H1Q8NG94 326 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 OR1N2Q8NGR9 330 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 ARPC1AQ92747 370 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 OR5B12Q96R08 314 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 FAM103A1Q9BTL3 118 aaKnown RBP10.76□□□□□ -0.69
PNKP-228ENST00000637325 GNB4Q9HAV0 340 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 ZMAT5Q9UDW3 170 aaKnown RBP10.76□□□□□ -0.69
PNKP-228ENST00000637325 FBXO7Q9Y3I1 522 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 NUBP2Q9Y5Y2 271 aa10.76□□□□□ -0.69
PNKP-228ENST00000637325 A0A0A6YYH2 397 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 A6NJ64 397 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 TMEM127O75204 238 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 EGR2P11161 476 aaPredicted RBP10.75□□□□□ -0.69
PNKP-228ENST00000637325 NFYAP23511 347 aaPredicted RBP10.75□□□□□ -0.69
PNKP-228ENST00000637325 CRIP2P52943 208 aaPredicted RBP10.75□□□□□ -0.69
PNKP-228ENST00000637325 ARPC4P59998 168 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 KRTAP10-11P60412 298 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 LSM3P62310 102 aaKnown RBP10.75□□□□□ -0.69
PNKP-228ENST00000637325 FXYD3Q14802 87 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 AKIRIN2Q53H80 203 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 DEFB121Q5J5C9 76 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 PYHIN1Q6K0P9 492 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 LFNGQ8NES3 379 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 GRPEL2Q8TAA5 225 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 MYOZ3Q8TDC0 251 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 C5orf30Q96GV9 206 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 TPSG1Q9NRR2 321 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 ZNF355PQ9NSJ1 428 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 ANXA10Q9UJ72 324 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 SPATA2Q9UM82 520 aa10.75□□□□□ -0.69
PNKP-228ENST00000637325 OR2W1Q9Y3N9 320 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms