RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 DDB2Q92466 427 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 IL22RA2Q969J5 263 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 S1PR3Q99500 378 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 CLEC7AQ9BXN2 247 aa17.16■□□□□ 0.34
CLN8-213ENST00000637156 IFNA21P01568 189 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 CT45A6P0DMU7 189 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 CT45A5P0DMU8 189 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 CT45A7P0DMV0 189 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 LPAR6P43657 344 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 IL15RAQ13261 267 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 PNKDQ8N490 385 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 KIR3DL3Q8N743 410 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 MBD6Q96DN6 1003 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 GON7Q9BXV9 100 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 TMED3Q9Y3Q3 217 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 KPTNQ9Y664 436 aa17.15■□□□□ 0.34
CLN8-213ENST00000637156 TOR1AO14656 332 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 SLC25A16P16260 332 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 USF1P22415 310 aaPredicted RBP17.14■□□□□ 0.33
CLN8-213ENST00000637156 COX7A1P24310 79 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 PRRX1P54821 245 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 HCP5Q6MZN7 132 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 ZNF383Q8NA42 475 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 ASB13Q8WXK3 278 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 RBMXL1Q96E39 390 aaKnown RBP17.14■□□□□ 0.33
CLN8-213ENST00000637156 C2orf50Q96LR7 162 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 HYLS1Q96M11 299 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 SIRPDQ9H106 197 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 UNC79Q9P2D8 2635 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 VDAC1P21796 283 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 ZNF137PP52743 207 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 ZNF816Q0VGE8 651 aaPredicted RBP17.14■□□□□ 0.33
CLN8-213ENST00000637156 TCTEX1D1Q8N7M0 179 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 BEND2Q8NDZ0 799 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 TMEM186Q96B77 213 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 NMES1Q9C002 83 aa17.14■□□□□ 0.33
CLN8-213ENST00000637156 UNKLQ9H9P5 680 aaKnown RBP17.14■□□□□ 0.33
CLN8-213ENST00000637156 FAM212BQ9NTI7 297 aaPredicted RBP17.14■□□□□ 0.33
CLN8-213ENST00000637156 ITPR2Q14571 2701 aa17.13■□□□□ 0.33
CLN8-213ENST00000637156 A0A096LNT2 108 aa17.13■□□□□ 0.33
CLN8-213ENST00000637156 MMP9P14780 707 aa17.13■□□□□ 0.33
CLN8-213ENST00000637156 IAH1Q2TAA2 248 aaPredicted RBP17.13■□□□□ 0.33
CLN8-213ENST00000637156 HLA-DRB5Q30154 266 aa17.13■□□□□ 0.33
CLN8-213ENST00000637156 VMO1Q7Z5L0 202 aa17.13■□□□□ 0.33
CLN8-213ENST00000637156 OR11H6Q8NGC7 330 aa17.13■□□□□ 0.33
CLN8-213ENST00000637156 PPP1R1CQ8WVI7 109 aa17.13■□□□□ 0.33
CLN8-213ENST00000637156 RANBP3Q9H6Z4 567 aaPredicted RBP17.13■□□□□ 0.33
CLN8-213ENST00000637156 GSKIPQ9P0R6 139 aa17.13■□□□□ 0.33
CLN8-213ENST00000637156 A0A0G2JRQ6 117 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 FCGR3BO75015 233 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 RPA2P15927 270 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 CYCSP99999 105 aaKnown RBP17.12■□□□□ 0.33
CLN8-213ENST00000637156 NMSQ5H8A3 153 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 OR4P4Q8NGL7 312 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 OR13D1Q8NGV5 346 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 PDZD2O15018 2839 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 DUXBA0A1W2PPF3 345 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 BUB1B-PAK6H3BSN5 160 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 IGKV1-5P01602 117 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 REG1BP48304 166 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 THBS3P49746 956 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 DVL1P1P54792 670 aaPredicted RBP17.12■□□□□ 0.33
CLN8-213ENST00000637156 GRPEL2Q8TAA5 225 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 CD300LFQ8TDQ1 290 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 HEXA-AS1Q9H8Q6 139 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 INSIG2Q9Y5U4 225 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 HECTD1Q9ULT8 2610 aa17.12■□□□□ 0.33
CLN8-213ENST00000637156 WNK2Q9Y3S1 2297 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 TRAV14DV4A0A0A6YYC5 116 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 S1PR2O95136 353 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 S100A1P23297 94 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 KLRD1Q13241 179 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 LRRC37A5PQ49AS3 106 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 LDLRAD2Q5SZI1 272 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 FAM219AQ8IW50 185 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 GPR146Q96CH1 333 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 PRELID3BQ9Y3B1 194 aa17.11■□□□□ 0.33
CLN8-213ENST00000637156 TOX4O94842 621 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 KRASP01116 189 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 IZUMO4Q1ZYL8 232 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 Q6ZRM9 215 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 PDZD9Q8IXQ8 264 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 ADTRPQ96IZ2 230 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 PCGF1Q9BSM1 259 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 MRPL20Q9BYC9 149 aaKnown RBP17.1■□□□□ 0.33
CLN8-213ENST00000637156 RNASEK-C17orf49H0YIS7 233 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 PAX8Q06710 450 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 Q5PR19 223 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 FAM71F2Q6NXP2 309 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 KRTAP1-3Q8IUG1 177 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 TBX15Q96SF7 602 aa17.1■□□□□ 0.33
CLN8-213ENST00000637156 ABCA2Q9BZC7 2435 aa17.09■□□□□ 0.33
CLN8-213ENST00000637156 LY6LH3BQJ8 138 aa17.09■□□□□ 0.33
CLN8-213ENST00000637156 RBFOX2O43251 390 aaKnown RBP eCLIP17.09■□□□□ 0.331e-7■■■□□ 14.8
CLN8-213ENST00000637156 HPRT1P00492 218 aa17.09■□□□□ 0.33
CLN8-213ENST00000637156 PSMB6P28072 239 aa17.09■□□□□ 0.33
CLN8-213ENST00000637156 G6PCP35575 357 aa17.09■□□□□ 0.33
CLN8-213ENST00000637156 PRSS57Q6UWY2 283 aa17.09■□□□□ 0.33
CLN8-213ENST00000637156 LSM10Q969L4 123 aaKnown RBP17.09■□□□□ 0.33
CLN8-213ENST00000637156 PLEKHA2Q9HB19 425 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms