RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CDC42EP2O14613 210 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 TNFSF12O43508 249 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 NDUFS5O43920 106 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 TNFSF13O75888 250 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 DPM2O94777 84 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 LALBAP00709 142 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 CA2P00918 260 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 APOC3P02656 99 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 MT-ND4LP03901 98 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 CD14P08571 375 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 CD48P09326 243 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 NHLRC4P0CG21 123 aaPredicted RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 ZNF728P0DKX0 622 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 OR12D1P0DN82 309 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 IGKV1-13P0DP09 117 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 LAMP1P11279 417 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 HIST1H1DP16402 221 aaKnown RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 ZNF14P17017 642 aaPredicted RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 IL2RGP31785 369 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 CCR2P41597 374 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 LPAR6P43657 344 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 RPL29P47914 159 aaKnown RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 SLC25A1P53007 311 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 RBM11P57052 281 aaKnown RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 UBA52P62987 128 aaKnown RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 GRB2P62993 217 aaKnown RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 SRPXP78539 464 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 HOXA4Q00056 320 aaPredicted RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 FABP5Q01469 135 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 PAX8Q06710 450 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 TMEM267Q0VDI3 215 aaPredicted RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 PNOCQ13519 176 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 PDGFRLQ15198 375 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 FAM153CQ494X1 144 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 Q499Y3 187 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 CENPWQ5EE01 88 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 MEIG1Q5JSS6 88 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 SPANXN3Q5MJ09 141 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 LYRM7Q5U5X0 104 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 AMMECR1LQ6DCA0 310 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 LCN8Q6JVE9 175 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 FOXI2Q6ZQN5 318 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 Q6ZRU5 148 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 FAM57BQ71RH2 274 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 ODF3L1Q8IXM7 274 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 NPWQ8N729 165 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 LY6G5BQ8NDX9 201 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 OR4C16Q8NGL9 310 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 OR10D4PQ8NGN7 298 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 OR2T27Q8NH04 317 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 MAGOHBQ96A72 148 aaKnown RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 IGF2BP2-AS1Q96M15 143 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 C17orf77Q96MU5 243 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 AP1S3Q96PC3 154 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 SOSTQ9BQB4 213 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 PRSS27Q9BQR3 290 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 MIEN1Q9BRT3 115 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 GINS4Q9BRT9 223 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 GGTLC1Q9BX51 225 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 SLIRPQ9GZT3 109 aaKnown RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 CBLN4Q9NTU7 201 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 TMEM45AQ9NWC5 275 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 ZNF226Q9NYT6 803 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 TAS2R8Q9NYW2 309 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 RPUSD1Q9UJJ7 312 aaKnown RBP2.37□□□□□ -2.03
VIM-210ENST00000637053 PROCRQ9UNN8 238 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 IER3IP1Q9Y5U9 82 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 SELENOKQ9Y6D0 94 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 PXMP4Q9Y6I8 212 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 ARID2Q68CP9 1835 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 NFASCO94856 1347 aa2.37□□□□□ -2.03
VIM-210ENST00000637053 PLXND1Q9Y4D7 1925 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 TECPR2O15040 1411 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 USP6P35125 1406 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 DOCK3Q8IZD9 2030 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 TRBV19A0A075B6N1 114 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 TRBV5-3A0A0A0MS03 114 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 TRAV4A0A0B4J268 109 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 A0A0B4J2A0 478 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 IGHV3OR16-9A0A0B4J2B5 98 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 TRDV1A0A1B0GX56 115 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 WI2-2373I1.2A0A1W2PRP0 233 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 C7orf71A4D174 169 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 COLCA2A8K830 154 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 BBIP1A8MTZ0 92 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF670-ZNF695F2Z2N8 137 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 H0Y9J4 135 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 LY6LH3BQJ8 138 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 CCDC179H3BU77 68 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 J3QRK9 145 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 K7EPK0 472 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 PDCD5O14737 125 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ATP6V0E1O15342 81 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 EDF1O60869 148 aaKnown RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 SCRG1O75711 98 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 CTSDP07339 412 aaPredicted RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 OR5AC1P0C628 307 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ERGP11308 486 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 PGAM2P15259 253 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 FKBP2P26885 142 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms