RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 GLDNQ6ZMI3 551 aaPredicted RBP12.82□□□□□ -0.36
CLN6-216ENST00000636876 TMEM219Q86XT9 240 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 ZNF383Q8NA42 475 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 ZBTB34Q8NCN2 500 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 OR5AN1Q8NGI8 311 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 OR51S1Q8NGJ8 323 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 TERB2Q8NHR7 220 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 BORCS5Q969J3 196 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 ADTRPQ96IZ2 230 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 HRASLSQ9HDD0 168 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 SLC2A8Q9NY64 477 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 TRIM77I1YAP6 450 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 IGKV1D-33P01593 117 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 IGKV1-33P01594 117 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 DUTP33316 252 aaKnown RBP12.81□□□□□ -0.36
CLN6-216ENST00000636876 EIF4EBP1Q13541 118 aaPredicted RBP12.81□□□□□ -0.36
CLN6-216ENST00000636876 HES1Q14469 280 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 LPCAT3Q6P1A2 487 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 C16orf87Q6PH81 154 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 LIAT1Q6ZQX7 453 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 ZNF818PQ6ZRF7 136 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 OR2T10Q8NGZ9 312 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 AKR1E2Q96JD6 320 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 HSD17B10Q99714 261 aaKnown RBP12.81□□□□□ -0.36
CLN6-216ENST00000636876 PRRT1Q99946 306 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 MCUBQ9NWR8 336 aa12.81□□□□□ -0.36
CLN6-216ENST00000636876 LINC00473A8K010 186 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 MOSP00540 346 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 APOA2P02652 100 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 PGAM2P15259 253 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 TMEM11P17152 192 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 MC5RP33032 325 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 TAGLNQ01995 201 aaKnown RBP12.8□□□□□ -0.36
CLN6-216ENST00000636876 HNF4GQ14541 408 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 ZNF66Q6ZN08 573 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 SLC38A6Q8IZM9 456 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 Q8N6K4 173 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 BVESQ8NE79 360 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 DDB2Q92466 427 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 MRGPRFQ96AM1 343 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 RBMXL1Q96E39 390 aaKnown RBP12.8□□□□□ -0.36
CLN6-216ENST00000636876 EAF1Q96JC9 268 aaPredicted RBP12.8□□□□□ -0.36
CLN6-216ENST00000636876 RSRP1Q9BUV0 290 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 SCP2D1Q9UJQ7 156 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 WASHC3Q9Y3C0 194 aa12.8□□□□□ -0.36
CLN6-216ENST00000636876 FAM181BA6NEQ2 426 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 H7C2Y5 167 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 GPR31O00270 319 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 CHST1O43916 411 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 OR2F2O95006 317 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 ECI1P42126 302 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 RPL30P62888 115 aaKnown RBP12.79□□□□□ -0.36
CLN6-216ENST00000636876 KCTD9Q7L273 389 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 C16orf82Q7Z2V1 217 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 PDPNQ86YL7 162 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 CMTM1Q8IZ96 169 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 OR13C8Q8NGS7 320 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 MARCH1Q8TCQ1 289 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 ZFAND2BQ8WV99 257 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 TCTEX1D2Q8WW35 142 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 RBM14Q96PK6 669 aaKnown RBP12.79□□□□□ -0.36
CLN6-216ENST00000636876 GPHA2Q96T91 129 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 RAB18Q9NP72 206 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 SLC35D1Q9NTN3 355 aa12.79□□□□□ -0.36
CLN6-216ENST00000636876 LINC00854A0A1B0GVQ3 168 aa12.78□□□□□ -0.36
CLN6-216ENST00000636876 TNFSF12O43508 249 aa12.78□□□□□ -0.36
CLN6-216ENST00000636876 RRASP10301 218 aa12.78□□□□□ -0.36
CLN6-216ENST00000636876 RPL15P61313 204 aaKnown RBP12.78□□□□□ -0.36
CLN6-216ENST00000636876 PHLDA2Q53GA4 152 aa12.78□□□□□ -0.36
CLN6-216ENST00000636876 IDO2Q6ZQW0 420 aa12.78□□□□□ -0.36
CLN6-216ENST00000636876 ZFAND1Q8TCF1 268 aa12.78□□□□□ -0.36
CLN6-216ENST00000636876 C7orf50Q9BRJ6 194 aaKnown RBP12.78□□□□□ -0.36
CLN6-216ENST00000636876 SLC25A33Q9BSK2 321 aa12.78□□□□□ -0.36
CLN6-216ENST00000636876 PRELID3BQ9Y3B1 194 aa12.78□□□□□ -0.36
CLN6-216ENST00000636876 NAP1L6A6NFF2 107 aa12.77□□□□□ -0.37
CLN6-216ENST00000636876 PGLYRP1O75594 196 aaPredicted RBP12.77□□□□□ -0.37
CLN6-216ENST00000636876 S100GP29377 79 aa12.77□□□□□ -0.37
CLN6-216ENST00000636876 CATR1Q13166 79 aa12.77□□□□□ -0.37
CLN6-216ENST00000636876 SURF2Q15527 256 aaPredicted RBP12.77□□□□□ -0.37
CLN6-216ENST00000636876 RTL8BQ17RB0 113 aa12.77□□□□□ -0.37
CLN6-216ENST00000636876 DHRS7BQ6IAN0 325 aaPredicted RBP12.77□□□□□ -0.37
CLN6-216ENST00000636876 ZNF486Q96H40 463 aaPredicted RBP12.77□□□□□ -0.37
CLN6-216ENST00000636876 MOB4Q9Y3A3 225 aa12.77□□□□□ -0.37
CLN6-216ENST00000636876 CENPXA8MT69 81 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 RNF212BA8MTL3 300 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 PLA2G10O15496 165 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 UPK1BO75841 260 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 IGKV1-16P04430 117 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 RLN1P04808 185 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 CTSDP07339 412 aaPredicted RBP12.76□□□□□ -0.37
CLN6-216ENST00000636876 PI3P19957 117 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 KIR2DS2P43631 304 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 RND3P61587 244 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 CBX3Q13185 183 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 OR2B11Q5JQS5 317 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 OR8H1Q8NGG4 311 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 OR51H1Q8NH63 302 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 RITA1Q96K30 269 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 RNF5Q99942 180 aa12.76□□□□□ -0.37
CLN6-216ENST00000636876 SLC2A9Q9NRM0 540 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms