RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 RGPD5Q99666 1765 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 IGHV3OR15-7A0A075B7D8 119 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 IGKV1-12A0A0C4DH73 117 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 VGLL3A8MV65 326 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 H3BSA7 217 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 PFDN6O15212 129 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 SSNA1O43805 119 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 IGKV1D-12P01611 117 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 APOEP02649 317 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 KRT7P08729 469 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 CD79BP40259 229 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 FOXA1P55317 472 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 MGAT3Q09327 533 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 TSPAN31Q12999 210 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 ZNF141Q15928 474 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 IGFBP7Q16270 282 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 MESTQ5EB52 335 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 AMMECR1LQ6DCA0 310 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 FAM19A5Q7Z5A7 132 aaPredicted RBP2.32□□□□□ -2.04
CLN5-212ENST00000636602 LRP11Q86VZ4 500 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 LYPD1Q8N2G4 141 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 EIF4E3Q8N5X7 224 aaKnown RBP2.32□□□□□ -2.04
CLN5-212ENST00000636602 SLC37A2Q8TED4 501 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 PACRGQ96M98 296 aaPredicted RBP2.32□□□□□ -2.04
CLN5-212ENST00000636602 MED18Q9BUE0 208 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 ABCG5Q9H222 651 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 PARVAQ9NVD7 372 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 ZNF443Q9Y2A4 671 aaPredicted RBP2.32□□□□□ -2.04
CLN5-212ENST00000636602 WNK3Q9BYP7 1800 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 A0A1W2PP64 1363 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 OVOS2A0A0J9YW53 1432 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 OVOS2Q6IE36 1432 aa2.32□□□□□ -2.04
CLN5-212ENST00000636602 LMO7Q8WWI1 1683 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 COL18A1P39060 1754 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 YLPM1P49750 1951 aaKnown RBP2.31□□□□□ -2.04
CLN5-212ENST00000636602 C4orf51C9J302 202 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 D6RAR5 112 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 H0Y980 276 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 M0QZ92 97 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 SLC16A4O15374 487 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 OR13C7P0DN81 318 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 RNASE2P10153 161 aaKnown RBP2.31□□□□□ -2.04
CLN5-212ENST00000636602 HRES1P13985 223 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 ZNF708P17019 499 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 H2BFSP57053 126 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 UBE2IP63279 158 aaKnown RBP2.31□□□□□ -2.04
CLN5-212ENST00000636602 MLLT11Q13015 90 aaPredicted RBP2.31□□□□□ -2.04
CLN5-212ENST00000636602 PDK2Q15119 407 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 PDGFRLQ15198 375 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 KRTAP25-1Q3LHN0 102 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 DEFB134Q4QY38 66 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 C10orf91Q5T1B1 145 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 OR51H1Q8NH63 302 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 OR10D3Q8NH80 312 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 ASB13Q8WXK3 278 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 ACY3Q96HD9 319 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 TIPINQ9BVW5 301 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 FGFR1OP2Q9NVK5 253 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 WASHC3Q9Y3C0 194 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 LINC00588Q9Y4M8 146 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 POLR3HQ9Y535 204 aaPredicted RBP2.31□□□□□ -2.04
CLN5-212ENST00000636602 KIF24Q5T7B8 1368 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 NSD3Q9BZ95 1437 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 NFAT5O94916 1531 aa2.31□□□□□ -2.04
CLN5-212ENST00000636602 PARP4Q9UKK3 1724 aaKnown RBP2.31□□□□□ -2.04
CLN5-212ENST00000636602 GGTLC3B5MD39 225 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 COPEO14579 308 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 SLC25A20O43772 301 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 E2F6O75461 281 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 TYMSP04818 313 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 OR12D1P0DN82 309 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 CRABP1P29762 137 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 MIPP30301 263 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 PPP1CCP36873 323 aaKnown RBP2.3□□□□□ -2.04
CLN5-212ENST00000636602 ANP32AP39687 249 aaKnown RBP2.3□□□□□ -2.04
CLN5-212ENST00000636602 HPCAP84074 193 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 BSPH1Q075Z2 132 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 DHRS2Q13268 280 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 PYDC2Q56P42 97 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 CST9Q5W186 159 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 Q6ZRU5 148 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 ATP5L2Q7Z4Y8 100 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 Q8N402 240 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 TLCD1Q96CP7 247 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 SLC25A44Q96H78 314 aaPredicted RBP2.3□□□□□ -2.04
CLN5-212ENST00000636602 ABHD14BQ96IU4 210 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 IGF2BP2-AS1Q96M15 143 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 OR7D2Q96RA2 312 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 DERL2Q9GZP9 239 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 EIF5A2Q9GZV4 153 aaKnown RBP2.3□□□□□ -2.04
CLN5-212ENST00000636602 OR51B6Q9H340 312 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 DNAJC12Q9UKB3 198 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 FIS1Q9Y3D6 152 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 OR51B4Q9Y5P0 310 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 RTL1A6NKG5 1358 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 CPDO75976 1380 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 BLMP54132 1417 aaPredicted RBP2.3□□□□□ -2.04
CLN5-212ENST00000636602 RGPD2P0DJD1 1756 aa2.3□□□□□ -2.04
CLN5-212ENST00000636602 VIRMAQ69YN4 1812 aaKnown RBP2.3□□□□□ -2.04
CLN5-212ENST00000636602 SHANK1Q9Y566 2161 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms