RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 HSD17B10Q99714 261 aaKnown RBP2.27□□□□□ -2.05
PSPC1-208ENST00000635562 NRTNQ99748 197 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 NRIP2Q9BQI9 281 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 PRADC1Q9BSG0 188 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 TMEM147Q9BVK8 224 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 C20orf85Q9H1P6 137 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 TMEM100Q9NV29 134 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 MED9Q9NWA0 146 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 SCN3BQ9NY72 215 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 ZNF226Q9NYT6 803 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 MED11Q9P086 117 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 SPRR3Q9UBC9 169 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 KLF13Q9Y2Y9 288 aaPredicted RBP2.27□□□□□ -2.05
PSPC1-208ENST00000635562 MED31Q9Y3C7 131 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 PYGO1Q9Y3Y4 419 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 V9GYS6 101 aa2.27□□□□□ -2.05
PSPC1-208ENST00000635562 INO80Q9ULG1 1556 aaPredicted RBP2.27□□□□□ -2.05
PSPC1-208ENST00000635562 MYH9P35579 1960 aaKnown RBP2.27□□□□□ -2.05
PSPC1-208ENST00000635562 FANCAO15360 1455 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 MYOM2P54296 1465 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 ANKRD31Q8N7Z5 1873 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 DYSFO75923 2080 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 ZC3H13Q5T200 1668 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 A0A087WW49 117 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 TRAV5A0A0B4J249 113 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 TRAV8-6A0A0B4J262 113 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 A0A0B4J2A0 478 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 LOC100130705A0A1B0GUX0 176 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 WI2-2373I1.2A0A1W2PRP0 233 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 RBMY1BA6NDE4 496 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 RBMY1EA6NEQ0 496 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 OR4C45A6NMZ5 311 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SAP18O00422 153 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 TRAF3IP2O43734 574 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 NDUFS5O43920 106 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 GYPCP04921 128 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 CRYBA1P05813 215 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 EIF4EP06730 217 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SOD3P08294 240 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 ADRA2AP08913 450 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SNRPCP09234 159 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 RBMY1DP0C7P1 496 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 RBMY1A1P0DJD3 496 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 CTLA4P16410 223 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 DRD3P35462 400 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 GNG4P50150 75 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 RAB5CP51148 216 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 ZNF140P52738 457 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SLC18A1P54219 525 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 CTBP2P56545 445 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 CACNG7P62955 275 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 INCA1Q0VD86 236 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 TMEM267Q0VDI3 215 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 DAZ2Q13117 558 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 PNOCQ13519 176 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 FZD2Q14332 565 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 JOSD1Q15040 202 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 TGIF1Q15583 401 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 CCL15Q16663 113 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 ZNF876PQ49A33 203 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 MESTQ5EB52 335 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SLC25A30Q5SVS4 291 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 ADAMTSL4-AS1Q5T5F5 129 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 LCN8Q6JVE9 175 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 FAAP20Q6NZ36 180 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 CNIH2Q6PI25 160 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 GLIPR1L1Q6UWM5 242 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 Q6ZRU5 148 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 TCF23Q7RTU1 214 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 DAZ4Q86SG3 579 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 FAM71E2Q8N5Q1 922 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SAMD12Q8N8I0 201 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 ZNF491Q8N8L2 437 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 C11orf72Q8NBR9 251 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 OR10AD1Q8NGE0 317 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 OR52R1Q8NGF1 315 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 OR51T1Q8NGJ9 327 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 OR10J6PQ8NGY7 276 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 FNDC9Q8TBE3 224 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 LCN9Q8WX39 176 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 CCL17Q92583 94 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SLAMF6Q96DU3 332 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 GALNT14Q96FL9 552 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 PGLYRP4Q96LB8 373 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 DERL3Q96Q80 235 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 PRSS27Q9BQR3 290 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 ANAPC13Q9BS18 74 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 RNF126Q9BV68 326 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SAMD10Q9BYL1 202 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SRXN1Q9BYN0 137 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 OR2J1Q9GZK6 312 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SLIRPQ9GZT3 109 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 TMEM133Q9H2Q1 129 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 SRMSQ9H3Y6 488 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 LIME1Q9H400 295 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 RNF122Q9H9V4 155 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 PDFQ9HBH1 243 aa2.26□□□□□ -2.05
PSPC1-208ENST00000635562 DAZ1Q9NQZ3 744 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 DAZ3Q9NR90 486 aaKnown RBP2.26□□□□□ -2.05
PSPC1-208ENST00000635562 MARCH5Q9NX47 278 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms