RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 LINC00527Q9UJ94 153 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 OR2W1Q9Y3N9 320 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 J3QRK9 145 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 SLC22A5O76082 557 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 NDUFA3O95167 84 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 PF4V1P10720 104 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 PTHLHP12272 177 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 ZNF182P17025 639 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-209ENST00000635450 NFYAP23511 347 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-209ENST00000635450 THBS3P49746 956 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 TAS2R20P59543 309 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 RPS16P62249 146 aaKnown RBP12.25□□□□□ -0.45
LINC00339-209ENST00000635450 TAGLNQ01995 201 aaKnown RBP12.25□□□□□ -0.45
LINC00339-209ENST00000635450 C5orf64Q2M2E5 130 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 LIN54Q6MZP7 749 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 ETV3LQ6ZN32 361 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 COMMD1Q8N668 190 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 ADTRPQ96IZ2 230 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 TSNAXQ99598 290 aaKnown RBP12.25□□□□□ -0.45
LINC00339-209ENST00000635450 SLC35D1Q9NTN3 355 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 NECAP2Q9NVZ3 263 aa12.25□□□□□ -0.45
LINC00339-209ENST00000635450 TSSC4Q9Y5U2 329 aaPredicted RBP12.25□□□□□ -0.45
LINC00339-209ENST00000635450 MEIS3P1A6NDR6 274 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 LINC01548A6NM66 108 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 RRHO14718 337 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 NOL3O60936 208 aaKnown RBP12.24□□□□□ -0.45
LINC00339-209ENST00000635450 HLA-DRB1P01911 266 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 EIF4EP06730 217 aaKnown RBP12.24□□□□□ -0.45
LINC00339-209ENST00000635450 CD33P20138 364 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 VDAC1P21796 283 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 PRSS3P35030 304 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 RPL5P46777 297 aaKnown RBP12.24□□□□□ -0.45
LINC00339-209ENST00000635450 ZNF645Q8N7E2 425 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 MRAPQ8TCY5 172 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 RAB2BQ8WUD1 216 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 FLYWCH2Q96CP2 140 aaKnown RBP12.24□□□□□ -0.45
LINC00339-209ENST00000635450 HSPB9Q9BQS6 159 aa12.24□□□□□ -0.45
LINC00339-209ENST00000635450 FAM25AB3EWG3 89 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 FAM25CB3EWG5 89 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 FAM25GB3EWG6 89 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 HPGDSO60760 199 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 HLA-DQB1P01920 261 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 PF4P02776 101 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 FCER2P06734 321 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 OR5H8P0DN80 308 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 RRASP10301 218 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 LINC00205P59089 165 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 RTL8BQ17RB0 113 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 TEX38Q6PEX7 206 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 WFDC9Q8NEX5 89 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 BCL7BQ9BQE9 202 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 FBXL15Q9H469 300 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 SCOCQ9UIL1 159 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 MRPS7Q9Y2R9 242 aaKnown RBP12.23□□□□□ -0.45
LINC00339-209ENST00000635450 COL7A1Q02388 2944 aa12.23□□□□□ -0.45
LINC00339-209ENST00000635450 DNAH9Q9NYC9 4486 aa12.22□□□□□ -0.45
LINC00339-209ENST00000635450 SPDEFO95238 335 aa12.22□□□□□ -0.45
LINC00339-209ENST00000635450 FCGR2CP31995 323 aa12.22□□□□□ -0.45
LINC00339-209ENST00000635450 TMBIM6P55061 237 aa12.22□□□□□ -0.45
LINC00339-209ENST00000635450 OR5AP2Q8NGF4 316 aa12.22□□□□□ -0.45
LINC00339-209ENST00000635450 C5orf30Q96GV9 206 aa12.22□□□□□ -0.45
LINC00339-209ENST00000635450 OR51J1Q9H342 316 aa12.22□□□□□ -0.45
LINC00339-209ENST00000635450 PARP11Q9NR21 331 aa12.22□□□□□ -0.45
LINC00339-209ENST00000635450 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
LINC00339-209ENST00000635450 SHOXO15266 292 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 TUSC2O75896 110 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 IGKV1-16P04430 117 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 IGF1P05019 195 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 ELK1P19419 428 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 DUTP33316 252 aaKnown RBP12.21□□□□□ -0.45
LINC00339-209ENST00000635450 LGALS7P47929 136 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 KRTAP10-11P60412 298 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 RPL23AP62750 156 aaKnown RBP12.21□□□□□ -0.45
LINC00339-209ENST00000635450 CDK10Q15131 360 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 PSG5Q15238 335 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 CXorf66Q5JRM2 361 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-209ENST00000635450 ZNF660Q6AZW8 331 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-209ENST00000635450 LCNL1Q6ZST4 164 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 LINC00482Q8N8I6 264 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 BVESQ8NE79 360 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 SNAPC3Q92966 411 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 HARBI1Q96MB7 349 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 ZFP57Q9NU63 452 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 ZNF580Q9UK33 172 aa12.21□□□□□ -0.45
LINC00339-209ENST00000635450 IGHV7-81A0A0B4J1V7 117 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 IGKV1D-13A0A0B4J2D9 117 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 K7EIL1 84 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 IGKV1-13P0DP09 117 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-209ENST00000635450 TAS2R46P59540 309 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 SPCS2Q15005 226 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 C8orf86Q6ZUL3 223 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 REC114Q7Z4M0 266 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 SNX29P2Q8IUI4 249 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 ABHD5Q8WTS1 349 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 SECTM1Q8WVN6 248 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 CLCC1Q96S66 551 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 SCPEP1Q9HB40 452 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 EHFQ9NZC4 300 aa12.2□□□□□ -0.46
LINC00339-209ENST00000635450 RBMX2Q9Y388 322 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms