RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 SMPD3Q9NY59 655 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-206ENST00000634451 COA4Q9NYJ1 87 aa9.72□□□□□ -0.85
LINC00339-206ENST00000634451 PEF1Q9UBV8 284 aaKnown RBP9.72□□□□□ -0.85
LINC00339-206ENST00000634451 ZNF785A8K8V0 405 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 TMEM14DPA8MWL7 114 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 CNIH1O95406 144 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
LINC00339-206ENST00000634451 CD40LGP29965 261 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 EWSR1Q01844 656 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00339-206ENST00000634451 ZNF45Q02386 682 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 C1orf100Q5SVJ3 147 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 LCN12Q6JVE5 192 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 IDO2Q6ZQW0 420 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 CYGBQ8WWM9 190 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 TSNAXQ99598 290 aaKnown RBP9.71□□□□□ -0.86
LINC00339-206ENST00000634451 NEURL2Q9BR09 285 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 LPAR5Q9H1C0 372 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 Q9N2K0 584 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 SLC35D1Q9NTN3 355 aa9.71□□□□□ -0.86
LINC00339-206ENST00000634451 SHISA3A0PJX4 238 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 FOXI3A8MTJ6 420 aaPredicted RBP9.7□□□□□ -0.86
LINC00339-206ENST00000634451 H3BUA1 57 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 SPDEFO95238 335 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 GNAO1P09471 354 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 TAGLNQ01995 201 aaKnown RBP9.7□□□□□ -0.86
LINC00339-206ENST00000634451 RPEL1Q2QD12 228 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 ACSM3Q53FZ2 586 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 RBM48Q5RL73 367 aaKnown RBP9.7□□□□□ -0.86
LINC00339-206ENST00000634451 C10orf55Q5SWW7 151 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 AHSA2Q719I0 299 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 PDPNQ86YL7 162 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 Q8N402 240 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 ADAD2Q8NCV1 583 aaKnown RBP9.7□□□□□ -0.86
LINC00339-206ENST00000634451 ZNF555Q8NEP9 628 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 CACNG8Q8WXS5 425 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 LINC00476Q8WZB0 136 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 WDR89Q96FK6 387 aaPredicted RBP9.7□□□□□ -0.86
LINC00339-206ENST00000634451 RNF5Q99942 180 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 SRD5A3Q9H8P0 318 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 PLEKHJ1Q9NW61 149 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 RDH8Q9NYR8 311 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 LRRC42Q9Y546 428 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 KMT2AQ03164 3969 aa9.7□□□□□ -0.86
LINC00339-206ENST00000634451 TRBV6-6A0A0A6YYG2 114 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 A0A0G2JLM5 398 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 MSGN1A6NI15 193 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 PPP5D1E7EU14 171 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 ITGB1BP1O14713 200 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 ZBTB25P24278 435 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 TMEM50BP56557 158 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 PLAC9Q5JTB6 97 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 RNLSQ5VYX0 342 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 MOB1BQ7L9L4 216 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 DNAH10Q8IVF4 4471 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 MAFIPQ8WZ33 124 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 PTX4Q96A99 478 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 ARHGAP5-AS1Q96IT6 56 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 HARBI1Q96MB7 349 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 AKIP1Q9NQ31 210 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 GHRLQ9UBU3 117 aa9.69□□□□□ -0.86
LINC00339-206ENST00000634451 ZNF230Q9UIE0 474 aaPredicted RBP9.69□□□□□ -0.86
LINC00339-206ENST00000634451 IRGMA1A4Y4 181 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 EFCAB10A6NFE3 127 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 OR2A4O95047 310 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 APOA2P02652 100 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 WNT4P56705 351 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 CLDN12P56749 244 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 TAS2R43P59537 309 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 RHOGP84095 191 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 PMS2P11Q13670 270 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 EXOSC2Q13868 293 aaKnown RBP9.68□□□□□ -0.86
LINC00339-206ENST00000634451 IGSF11Q5DX21 431 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 KCNG3Q8TAE7 436 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 EDARADDQ8WWZ3 215 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 OR2D2Q9H210 308 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 SDHAF2Q9NX18 166 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 SIGLEC8Q9NYZ4 499 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 PSORS1C1Q9UIG5 152 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 ZNF221Q9UK13 617 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 S4R3C0 116 aa9.68□□□□□ -0.86
LINC00339-206ENST00000634451 MYL12BO14950 172 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 TPPPO94811 219 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 LY6G6CO95867 125 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 IGHV3-23P01764 117 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 UBBP0CG47 229 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 GUCA2BQ16661 112 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 DEFB114Q30KQ6 69 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 MOGAT2Q3SYC2 334 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 NANOGP1Q8N7R0 232 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 PHB2Q99623 299 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 PECRQ9BY49 303 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 C12orf4Q9NQ89 552 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 KCNK7Q9Y2U2 307 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 DMRT1Q9Y5R6 373 aa9.67□□□□□ -0.86
LINC00339-206ENST00000634451 OR11H12B2RN74 326 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 BET1O15155 118 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 CD1AP06126 327 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 AADACP22760 399 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 LGALS7P47929 136 aa9.66□□□□□ -0.86
LINC00339-206ENST00000634451 TNXAQ16473 311 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms