RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 BTN1A1Q13410 526 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 C10orf91Q5T1B1 145 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 SPNS3Q6ZMD2 512 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 WDR86Q86TI4 376 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 YAE1D1Q9NRH1 226 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 IFNA1P01562 189 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 RCC1P18754 421 aaPredicted RBP10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 SPRNQ5BIV9 151 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 S1PR3Q99500 378 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 RCL1Q9Y2P8 373 aaKnown RBP10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 FLNCQ14315 2725 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 RAB19A4D1S5 217 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 SNAPINO95295 136 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 IGHV4-39P01824 125 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 LIPFP07098 398 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 HNF1AP20823 631 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 IL34Q6ZMJ4 242 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 LILRB1Q8NHL6 650 aaPredicted RBP10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 C14orf79Q96F83 325 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 DCTN5Q9BTE1 182 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 HINT2Q9BX68 163 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 PSG11Q9UQ72 335 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 ANKRD17O75179 2603 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 A0A1W2PPE3 182 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 HKR1P10072 659 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 DTX2Q86UW9 622 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 COMMD1Q8N668 190 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 RPEQ96AT9 228 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 RAB40CQ96S21 281 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 LY86O95711 162 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 PRB3Q04118 309 aaPredicted RBP10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 GAPTQ8N292 157 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 TCTEX1D2Q8WW35 142 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 C7orf69Q9H7B7 122 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 GFOD1Q9NXC2 390 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 LPAR3Q9UBY5 353 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 FBXO7Q9Y3I1 522 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 ARFGEF3Q5TH69 2177 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 YLPM1P49750 1951 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 F2RL1P55085 397 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 OR2B11Q5JQS5 317 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 LYPD2Q6UXB3 125 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 SLC25A16P16260 332 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 MOB3BQ86TA1 216 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 OR2C3Q8N628 320 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 CD300LFQ8TDQ1 290 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 GLYATL2Q8WU03 294 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 CCL28Q9NRJ3 127 aa10.36□□□□□ -0.75
SYNGAP1-207ENST00000628646 BSNQ9UPA5 3926 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 NOTCH3Q9UM47 2321 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 GAPDHP04406 335 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 ATF4P18848 351 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 RND3P61587 244 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 TMEM187Q14656 261 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 IGSF11Q5DX21 431 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 LYZL2Q7Z4W2 148 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 HSD17B11Q8NBQ5 300 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 IL22RA2Q969J5 263 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 TMEM204Q9BSN7 226 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 BEX4Q9NWD9 120 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 ACANP16112 2415 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 MMP9P14780 707 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 PRRX1P54821 245 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 C9orf152Q5JTZ5 239 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 PRAMEF5Q5TYX0 476 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 TMEM222Q9H0R3 208 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 POMT1Q9Y6A1 747 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 CEBPZOSA8MTT3 80 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 UMAD1C9J7I0 102 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 SCTP09683 121 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 ERVFRD-1P60508 538 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 CLINT1Q14677 625 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 LRTM2Q8N967 370 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 CIB3Q96Q77 187 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 FBXL17Q9UF56 701 aa10.35□□□□□ -0.75
SYNGAP1-207ENST00000628646 NDUFS8O00217 210 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 TNFSF12O43508 249 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 SSSCA1O60232 199 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 GATA4P43694 442 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 H2BFWTQ7Z2G1 175 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 C5orf24Q7Z6I8 188 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 OR13D1Q8NGV5 346 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 MSI2Q96DH6 328 aaKnown RBP10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 C18orf12Q96KH6 178 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 RSRP1Q9BUV0 290 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 PATZ1Q9HBE1 687 aaKnown RBP10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 DEDDO75618 318 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 CD55P08174 381 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 CCL3L1P16619 93 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 PPP1CCP36873 323 aaKnown RBP10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 KRTAP10-9P60411 292 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 C22orf15Q8WYQ4 148 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 SMIM8Q96KF7 97 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 CALYQ9NYX4 217 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 JMJD1CQ15652 2540 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 H0Y980 276 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 M0R036 132 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 HBZP02008 142 aa10.34□□□□□ -0.75
SYNGAP1-207ENST00000628646 ACAA1P09110 424 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms