RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 RAB9AP51151 201 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 RPS16P62249 146 aaKnown RBP13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 RUNX1Q01196 453 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 C19orf54Q5BKX5 351 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 C9orf66Q5T8R8 295 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 Q6ZS49 121 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 OR11H1Q8NG94 326 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 MAFIPQ8WZ33 124 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 FLYWCH2Q96CP2 140 aaKnown RBP13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 GINS4Q9BRT9 223 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 GNB4Q9HAV0 340 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 SLC35D1Q9NTN3 355 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 A3GALT2U3KPV4 340 aa13.39□□□□□ -0.27
SPTAN1-214ENST00000628614 I3L521 148 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 FCN1O00602 326 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 OR8U8P0C7N1 319 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 LINC00205P59089 165 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 TAGLNQ01995 201 aaKnown RBP13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 DCTN2Q13561 401 aaKnown RBP13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 KIAA0141Q14154 515 aaPredicted RBP13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 PYHIN1Q6K0P9 492 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 SFXN4Q6P4A7 337 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 ZNF562Q6V9R5 426 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 CLCC1Q96S66 551 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 SDHAF2Q9NX18 166 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 DAPK2Q9UIK4 370 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 RBM7Q9Y580 266 aaKnown RBP13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 NUBP2Q9Y5Y2 271 aa13.38□□□□□ -0.27
SPTAN1-214ENST00000628614 RAMP3O60896 148 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 CA2P00918 260 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 DGCR2P98153 550 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 ZNF616Q08AN1 781 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 CBX3Q13185 183 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 CDNFQ49AH0 187 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 AKIRIN2Q53H80 203 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 DEFB121Q5J5C9 76 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 PPP1R27Q86WC6 154 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 OR1N2Q8NGR9 330 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 OR51E2Q9H255 320 aa13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 RRP15Q9Y3B9 282 aaKnown RBP13.37□□□□□ -0.27
SPTAN1-214ENST00000628614 SEC14L6B5MCN3 397 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 SLC25A17O43808 307 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 SOX15O60248 233 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 EGR2P11161 476 aaPredicted RBP13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 CD40LGP29965 261 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 LGALS7P47929 136 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 LUMP51884 338 aaPredicted RBP13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 PITPNAQ00169 270 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 ACTBL2Q562R1 376 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 HACD4Q5VWC8 232 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 UNQ5815/PRO19632Q6UWF5 114 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 ARPC1AQ92747 370 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 OR5B12Q96R08 314 aa13.36□□□□□ -0.27
SPTAN1-214ENST00000628614 DNAH9Q9NYC9 4486 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 RRASP10301 218 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 SNRPBP14678 240 aaKnown RBP13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 SDC2P34741 201 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 SCAND1P57086 179 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 GNB1P62873 340 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 RTL8BQ17RB0 113 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 H1FOOQ8IZA3 346 aaPredicted RBP13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 LGALS14Q8TCE9 139 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 ADTRPQ96IZ2 230 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 HARBI1Q96MB7 349 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 FAM103A1Q9BTL3 118 aaKnown RBP13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 DCSTAMPQ9H295 470 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 TPSG1Q9NRR2 321 aa13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 ELF5Q9UKW6 265 aaPredicted RBP13.35□□□□□ -0.27
SPTAN1-214ENST00000628614 IGKV1D-8A0A087WSZ0 117 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 CTXN2P0C2S0 81 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 GNG2P59768 71 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 MXD1Q05195 221 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 FXYD3Q14802 87 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 NEDD8Q15843 81 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 LFNGQ8NES3 379 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 C5orf30Q96GV9 206 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 ST6GALNAC5Q9BVH7 336 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 SLA2Q9H6Q3 261 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 RHBDL2Q9NX52 303 aa13.34□□□□□ -0.27
SPTAN1-214ENST00000628614 LOC100506127A0A0U1RQW1 187 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 TMEM235A6NFC5 223 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 SHOXO15266 292 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 IGLV2-23P01705 113 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 LGALS1P09382 135 aaKnown RBP13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 CD36P16671 472 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 INSL3P51460 131 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 TMEM177Q53S58 311 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 ASPHD1Q5U4P2 390 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 BVESQ8NE79 360 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 GRPEL2Q8TAA5 225 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 CASTOR1Q8WTX7 329 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 NUDCD2Q8WVJ2 157 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 ETV7Q9Y603 341 aa13.33□□□□□ -0.28
SPTAN1-214ENST00000628614 LINC01619G3V211 115 aa13.32□□□□□ -0.28
SPTAN1-214ENST00000628614 ARPC1BO15143 372 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-214ENST00000628614 CNIH1O95406 144 aa13.32□□□□□ -0.28
SPTAN1-214ENST00000628614 DUTP33316 252 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-214ENST00000628614 TPPP2P59282 170 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms