RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 LOC100130705A0A1B0GUX0 176 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 M0R1X1 148 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 BMPR1BO00238 502 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 PROP1O75360 226 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 EDN2P20800 178 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 ZBTB25P24278 435 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 DCKP27707 260 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 EXOSC2Q13868 293 aaKnown RBP11.05□□□□□ -0.64
PNKP-218ENST00000625299 MOB1BQ7L9L4 216 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 NKAIN3Q8N8D7 197 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 PGLYRP3Q96LB9 341 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 HARBI1Q96MB7 349 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 SLC29A1Q99808 456 aa11.05□□□□□ -0.64
PNKP-218ENST00000625299 ITGB1BP1O14713 200 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 MPPED1O15442 326 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 NAPSAO96009 420 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 IGLV2-23P01705 113 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 PRH1P02810 166 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 HLA-DRB3P79483 266 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 DEFB114Q30KQ6 69 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 ZNF880Q6PDB4 577 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 SLC16A13Q7RTY0 426 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 DERL3Q96Q80 235 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 OVOL2Q9BRP0 275 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 UQCC2Q9BRT2 126 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 NICN1Q9BSH3 213 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 HDHD3Q9BSH5 251 aaPredicted RBP11.04□□□□□ -0.64
PNKP-218ENST00000625299 GGTLC1Q9BX51 225 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 TMEM59Q9BXS4 323 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 KCNK15Q9H427 330 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 GHRLQ9UBU3 117 aa11.04□□□□□ -0.64
PNKP-218ENST00000625299 EXOSC1Q9Y3B2 195 aaKnown RBP11.04□□□□□ -0.64
PNKP-218ENST00000625299 A0A0J9YWU9 116 aa11.03□□□□□ -0.64
PNKP-218ENST00000625299 MSGN1A6NI15 193 aa11.03□□□□□ -0.64
PNKP-218ENST00000625299 DEDDO75618 318 aa11.03□□□□□ -0.64
PNKP-218ENST00000625299 OR9G9P0C7N8 305 aa11.03□□□□□ -0.64
PNKP-218ENST00000625299 HTR2CP28335 458 aa11.03□□□□□ -0.64
PNKP-218ENST00000625299 RASSF2P50749 326 aa11.03□□□□□ -0.64
PNKP-218ENST00000625299 RPS27AP62979 156 aaKnown RBP11.03□□□□□ -0.64
PNKP-218ENST00000625299 RHOGP84095 191 aa11.03□□□□□ -0.64
PNKP-218ENST00000625299 ADAD2Q8NCV1 583 aaKnown RBP11.03□□□□□ -0.64
PNKP-218ENST00000625299 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
PNKP-218ENST00000625299 AKIP1Q9NQ31 210 aa11.03□□□□□ -0.64
PNKP-218ENST00000625299 PLEKHJ1Q9NW61 149 aa11.03□□□□□ -0.64
PNKP-218ENST00000625299 ZNF230Q9UIE0 474 aaPredicted RBP11.03□□□□□ -0.64
PNKP-218ENST00000625299 IRGMA1A4Y4 181 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 C2orf70A6NJV1 201 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 SHOXO15266 292 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 WBP4O75554 376 aaKnown RBP11.02□□□□□ -0.65
PNKP-218ENST00000625299 TUSC2O75896 110 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 CRYGBP07316 175 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 SCTP09683 121 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 FOLR2P14207 255 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 EWSR1Q01844 656 aaKnown RBP eCLIP11.02□□□□□ -0.65
PNKP-218ENST00000625299 ATP5G2Q06055 141 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 TNXAQ16473 311 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.65
PNKP-218ENST00000625299 THRSPQ92748 146 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 GGHQ92820 318 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 ZC4H2Q9NQZ6 224 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 AK3Q9UIJ7 227 aa11.02□□□□□ -0.65
PNKP-218ENST00000625299 DIMT1Q9UNQ2 313 aaKnown RBP11.02□□□□□ -0.65
PNKP-218ENST00000625299 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
PNKP-218ENST00000625299 FAM223BA6NKX1 122 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 PPP5D1E7EU14 171 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 HLA-AP01891 365 aaKnown RBP11.01□□□□□ -0.65
PNKP-218ENST00000625299 UBBP0CG47 229 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 KIR2DS2P43631 304 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 CBX3Q13185 183 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 MED21Q13503 144 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 KCNG3Q8TAE7 436 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 CACNG8Q8WXS5 425 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 ACOT12Q8WYK0 555 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 PTX4Q96A99 478 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 RDH8Q9NYR8 311 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 KLK5Q9Y337 293 aaPredicted RBP11.01□□□□□ -0.65
PNKP-218ENST00000625299 HECTD4Q9Y4D8 3996 aa11.01□□□□□ -0.65
PNKP-218ENST00000625299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11□□□□□ -0.65
PNKP-218ENST00000625299 ZNF45Q02386 682 aa11□□□□□ -0.65
PNKP-218ENST00000625299 UNC119Q13432 240 aa11□□□□□ -0.65
PNKP-218ENST00000625299 IDO2Q6ZQW0 420 aa11□□□□□ -0.65
PNKP-218ENST00000625299 LYG2Q86SG7 212 aa11□□□□□ -0.65
PNKP-218ENST00000625299 OR52B4Q8NGK2 314 aa11□□□□□ -0.65
PNKP-218ENST00000625299 SRSF12Q8WXF0 261 aaKnown RBP11□□□□□ -0.65
PNKP-218ENST00000625299 TMEM80Q96HE8 168 aa11□□□□□ -0.65
PNKP-218ENST00000625299 C9orf16Q9BUW7 83 aa11□□□□□ -0.65
PNKP-218ENST00000625299 RIMS4Q9H426 269 aaPredicted RBP11□□□□□ -0.65
PNKP-218ENST00000625299 TECRQ9NZ01 308 aaKnown RBP11□□□□□ -0.65
PNKP-218ENST00000625299 KIAA1109Q2LD37 5005 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 A0A0A6YYD4 124 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 SRRM4A7MD48 611 aaKnown RBP10.99□□□□□ -0.65
PNKP-218ENST00000625299 SCAF4O95104 1147 aaKnown RBP10.99□□□□□ -0.65
PNKP-218ENST00000625299 OR2C1O95371 312 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 CELP19835 753 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 MAPK3P27361 379 aaPredicted RBP10.99□□□□□ -0.65
PNKP-218ENST00000625299 TAS2R43P59537 309 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 TMEM61Q8N0U2 210 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 ZNF555Q8NEP9 628 aa10.99□□□□□ -0.65
PNKP-218ENST00000625299 TM2D1Q9BX74 207 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms