RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y DUSP21Q9H596 190 aa12.37□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y PLEKHJ1Q9NW61 149 aa12.37□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y A0A0G2JLM5 398 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y RGS10O43665 173 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y PSMA1P25786 263 aaKnown RBP12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y CEACAM6P40199 344 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y SYNJ2BPP57105 145 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y TPBGQ13641 420 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y ZNF880Q6PDB4 577 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y NRG4Q8WWG1 115 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y TSNAXQ99598 290 aaKnown RBP12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y C11orf54Q9H0W9 315 aaPredicted RBP12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y PLGRKTQ9HBL7 147 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y RETNQ9HD89 108 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y LYSTQ99698 3801 aa12.36□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y CSMD3Q7Z407 3707 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y A0A0A6YYD4 124 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y TRBV6-6A0A0A6YYG2 114 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y SLC17A2O00624 439 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y SLC25A17O43808 307 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y ARL6IP5O75915 188 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y IGKV1-16P04430 117 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y RPS25P62851 125 aaKnown RBP12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y KLF5Q13887 457 aaPredicted RBP12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y TMEM91Q6ZNR0 172 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y LPAR5Q9H1C0 372 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y OR1A1Q9P1Q5 309 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y MGAT4AQ9UM21 535 aa12.35□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y ZBTB25P24278 435 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y RANBP1P43487 201 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y LINC00205P59089 165 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y DEFA5Q01523 94 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y MLLT11Q13015 90 aaPredicted RBP12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y P2RY14Q15391 338 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y RAB11BQ15907 218 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y TATDN3Q17R31 274 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y IL34Q6ZMJ4 242 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y FAM89BQ8N5H3 189 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y ZNF383Q8NA42 475 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y IL17DQ8TAD2 202 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y EDARADDQ8WWZ3 215 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y GFI1Q99684 422 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y FAM110AQ9BQ89 295 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y AGMATQ9BSE5 352 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y CCDC90BQ9GZT6 254 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y AK3Q9UIJ7 227 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y ZNF221Q9UK13 617 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y ADAM30Q9UKF2 790 aa12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y AK6Q9Y3D8 172 aaKnown RBP12.34□□□□□ -0.43
CD99-211ENST00000623253_PAR_Y H3BUA1 57 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y ITGB1BP1O14713 200 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y SOCS1O15524 211 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y SPDEFO95238 335 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y MOGAT2Q3SYC2 334 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y LCN12Q6JVE5 192 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PRSS48Q7RTY5 328 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y VCX3BQ9H321 246 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PEF1Q9UBV8 284 aaKnown RBP12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y HSF4Q9ULV5 492 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y HYDINQ4G0P3 5121 aa12.33□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y IZUMO1RA6ND01 250 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PROP1O75360 226 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y APOA2P02652 100 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y CSN3P07498 182 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y CRHBPP24387 322 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y CALRP27797 417 aaKnown RBP12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y HLA-DRB3P79483 266 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PJVKQ0ZLH3 352 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y RPEL1Q2QD12 228 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y Q8N402 240 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y MGLLQ99685 303 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y HDHD3Q9BSH5 251 aaPredicted RBP12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PLEKHA3Q9HB20 300 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y C12orf4Q9NQ89 552 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y COA4Q9NYJ1 87 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y CEPT1Q9Y6K0 416 aa12.32□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y FOXI3A8MTJ6 420 aaPredicted RBP12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y M0R1X1 148 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y TRBV12-3P01733 135 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y SCTP09683 121 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y AADACP22760 399 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y LGALS7P47929 136 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PSMD7P51665 324 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y CD81P60033 236 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y FABP5Q01469 135 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y PDPNQ86YL7 162 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y BVESQ8NE79 360 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y FAM3DQ96BQ1 224 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y THAP7Q9BT49 309 aaPredicted RBP12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y Q9N2K0 584 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y ACOT13Q9NPJ3 140 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y V9GY05 133 aa12.31□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y SHISA3A0PJX4 238 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y APELAP0DMC3 54 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y MAP2K4P45985 399 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y HSPA13P48723 471 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y TMEM50BP56557 158 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y CLDN12P56749 244 aa12.3□□□□□ -0.44
CD99-211ENST00000623253_PAR_Y DYRK1AQ13627 763 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms