RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 GABRA2P47869 451 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 PSMB3P49720 205 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 MEF2BQ02080 365 aaPredicted RBP8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 FAM53AQ6NSI3 398 aaPredicted RBP8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 VWA1Q6PCB0 445 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 SPNS3Q6ZMD2 512 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 BEND4Q6ZU67 534 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 PIP4P1Q86T03 277 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 CD177Q8N6Q3 437 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR10G9Q8NGN4 311 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR10G7Q8NGN6 311 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 NCOR1P1Q9H4R4 102 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 MIOXQ9UGB7 285 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 METRNQ9UJH8 293 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 GAB2Q9UQC2 676 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 KIAA2026Q5HYC2 2103 aa8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 CHD3Q12873 2000 aaKnown RBP8.02□□□□□ -1.13
IGHV3-54-201ENST00000622166 IGHV1-18A0A0C4DH31 117 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 IGHV3-64DA0A0J9YX35 117 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 SMCO3A2RU48 225 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 LINC00473A8K010 186 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 C15orf62A8K5M9 175 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 AHRRA9YTQ3 701 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 C17orf112F2Z3M2 114 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 ITGB1BP1O14713 200 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 ATXN7O15265 892 aaPredicted RBP8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 RBFOX2O43251 390 aaKnown RBP eCLIP8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 YPEL1O60688 119 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 CGAP01215 116 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 TRGC2P03986 189 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 TRGC1P0CF51 173 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 GZMHP20718 246 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 S100A2P29034 98 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 PRDX2P32119 198 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 TFF3Q07654 80 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 FOXF2Q12947 444 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 TRIP6Q15654 476 aaKnown RBP8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 ACOT6Q3I5F7 207 aaPredicted RBP8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 PDLIM3Q53GG5 364 aaPredicted RBP8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR2B11Q5JQS5 317 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 FFAR4Q5NUL3 377 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 CXorf67Q86X51 503 aaPredicted RBP8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 TGIF2LYQ8IUE0 185 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 HIST3H2BBQ8N257 126 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 CNEP1R1Q8N9A8 125 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR52E5Q8NH55 327 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 ABHD5Q8WTS1 349 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 LRRC29Q8WV35 223 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 EDARADDQ8WWZ3 215 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 FRZBQ92765 325 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 R3HDM4Q96D70 268 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 SNX22Q96L94 193 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 YPEL2Q96QA6 119 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 SMIM7Q9BQ49 75 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 GGACTQ9BVM4 153 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 NPCDR1Q9BY65 106 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 SRD5A3Q9H8P0 318 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 ZNF71Q9NQZ8 489 aaPredicted RBP8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 GAR1Q9NY12 217 aaKnown RBP8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 JPT1Q9UK76 154 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 PSG11Q9UQ72 335 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 WDR83OSQ9Y284 106 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 DMRT1Q9Y5R6 373 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 URGCP-MRPS24S4R325 110 aa8.01□□□□□ -1.13
IGHV3-54-201ENST00000622166 SRRM5B3KS81 715 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 F2RL2O00254 374 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 MGST3O14880 152 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 ST8SIA5O15466 376 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 NKX2-8O15522 239 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 HPRT1P00492 218 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 IGHV2-70P01814 119 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 TFF1P04155 84 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 DUTP33316 252 aaKnown RBP8□□□□□ -1.13
IGHV3-54-201ENST00000622166 KIR2DS2P43631 304 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 FABP6P51161 128 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 CCL11P51671 97 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 SPCS3P61009 180 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 RPL23P62829 140 aaKnown RBP8□□□□□ -1.13
IGHV3-54-201ENST00000622166 NKX6-1P78426 367 aaPredicted RBP8□□□□□ -1.13
IGHV3-54-201ENST00000622166 P2RY6Q15077 328 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 BSXQ3C1V8 233 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 C3orf36Q3SXR2 165 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 Q3ZCU0 254 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 NCR3LG1Q68D85 454 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 BTNL3Q6UXE8 466 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 BHLHA15Q7RTS1 189 aaPredicted RBP8□□□□□ -1.13
IGHV3-54-201ENST00000622166 C16orf82Q7Z2V1 217 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 Q8N7P7 452 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 ZNF709Q8N972 641 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 FDCSPQ8NFU4 85 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 PPP1R35Q8TAP8 253 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 RAB24Q969Q5 203 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 ZDHHC16Q969W1 377 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 NEIL1Q96FI4 390 aaPredicted RBP8□□□□□ -1.13
IGHV3-54-201ENST00000622166 SSX3Q99909 188 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 SLC25A22Q9H936 323 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 UFSP2Q9NUQ7 469 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 OR6C3Q9NZP0 311 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 SLC25A15Q9Y619 301 aa8□□□□□ -1.13
IGHV3-54-201ENST00000622166 IGHV3-43A0A0B4J1X8 118 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms