RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 SCOCQ9UIL1 159 aa15.94■□□□□ 0.14
SMC6-210ENST00000621152 FOXA2Q9Y261 457 aaPredicted RBP15.94■□□□□ 0.14
SMC6-210ENST00000621152 TRBV6-7A0A0A0MS04 114 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 SOX15O60248 233 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 APOA2P02652 100 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 OR8U8P0C7N1 319 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 CRIP2P52943 208 aaPredicted RBP15.93■□□□□ 0.14
SMC6-210ENST00000621152 GNB1P62873 340 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 ZNF616Q08AN1 781 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 C19orf54Q5BKX5 351 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 UNQ5815/PRO19632Q6UWF5 114 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 NR2C2APQ86WQ0 139 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 PDPNQ86YL7 162 aa15.93■□□□□ 0.14
SMC6-210ENST00000621152 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.93■□□□□ 0.14
SMC6-210ENST00000621152 FAM103A1Q9BTL3 118 aaKnown RBP15.93■□□□□ 0.14
SMC6-210ENST00000621152 YTHDF1Q9BYJ9 559 aaKnown RBP15.93■□□□□ 0.14
SMC6-210ENST00000621152 ECI1P42126 302 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 CD69Q07108 199 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 ZNF260Q3ZCT1 412 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 AKIRIN2Q53H80 203 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 TCTEX1D1Q8N7M0 179 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 LFNGQ8NES3 379 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 CABLES2Q9BTV7 478 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 SLC35D1Q9NTN3 355 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 TXNL4BQ9NX01 149 aaKnown RBP15.92■□□□□ 0.14
SMC6-210ENST00000621152 SDHAF2Q9NX18 166 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 RBM7Q9Y580 266 aaKnown RBP15.92■□□□□ 0.14
SMC6-210ENST00000621152 DNAH3Q8TD57 4116 aa15.92■□□□□ 0.14
SMC6-210ENST00000621152 CA2P00918 260 aa15.91■□□□□ 0.14
SMC6-210ENST00000621152 FGF9P31371 208 aaPredicted RBP15.91■□□□□ 0.14
SMC6-210ENST00000621152 CDNFQ49AH0 187 aa15.91■□□□□ 0.14
SMC6-210ENST00000621152 ACTBL2Q562R1 376 aa15.91■□□□□ 0.14
SMC6-210ENST00000621152 ASPHD1Q5U4P2 390 aa15.91■□□□□ 0.14
SMC6-210ENST00000621152 MS4A10Q96PG2 267 aa15.91■□□□□ 0.14
SMC6-210ENST00000621152 GINS4Q9BRT9 223 aa15.91■□□□□ 0.14
SMC6-210ENST00000621152 ALX4Q9H161 411 aaPredicted RBP15.91■□□□□ 0.14
SMC6-210ENST00000621152 OR2D2Q9H210 308 aa15.91■□□□□ 0.14
SMC6-210ENST00000621152 ELF5Q9UKW6 265 aaPredicted RBP15.91■□□□□ 0.14
SMC6-210ENST00000621152 STUB1Q9UNE7 303 aa15.91■□□□□ 0.14
SMC6-210ENST00000621152 NOTOA8MTQ0 251 aa15.9■□□□□ 0.14
SMC6-210ENST00000621152 SLC25A17O43808 307 aa15.9■□□□□ 0.14
SMC6-210ENST00000621152 SPDEFO95238 335 aa15.9■□□□□ 0.14
SMC6-210ENST00000621152 FXYD3Q14802 87 aa15.9■□□□□ 0.14
SMC6-210ENST00000621152 VAX1Q5SQQ9 334 aa15.9■□□□□ 0.14
SMC6-210ENST00000621152 DCUN1D4Q92564 292 aa15.9■□□□□ 0.14
SMC6-210ENST00000621152 FCGR1BQ92637 280 aa15.9■□□□□ 0.14
SMC6-210ENST00000621152 PRR25Q96S07 402 aa15.9■□□□□ 0.14
SMC6-210ENST00000621152 SSR3Q9UNL2 185 aa15.9■□□□□ 0.14
SMC6-210ENST00000621152 IGKV1D-8A0A087WSZ0 117 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 CNIH1O95406 144 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 DIRAS3O95661 229 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 CD40LGP29965 261 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 LGALS7P47929 136 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 DCTN2Q13561 401 aaKnown RBP15.89■□□□□ 0.13
SMC6-210ENST00000621152 ARL6IP1Q15041 203 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 SRSF7Q16629 238 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMC6-210ENST00000621152 TPRA1Q86W33 373 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 BVESQ8NE79 360 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 B9D2Q9BPU9 175 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 CENPOQ9BU64 300 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 ST6GALNAC5Q9BVH7 336 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 TPSG1Q9NRR2 321 aa15.89■□□□□ 0.13
SMC6-210ENST00000621152 ARPC1BO15143 372 aaKnown RBP15.88■□□□□ 0.13
SMC6-210ENST00000621152 PYHIN1Q6K0P9 492 aa15.88■□□□□ 0.13
SMC6-210ENST00000621152 C11orf87Q6NUJ2 197 aa15.88■□□□□ 0.13
SMC6-210ENST00000621152 Q6ZS49 121 aa15.88■□□□□ 0.13
SMC6-210ENST00000621152 GRPEL2Q8TAA5 225 aa15.88■□□□□ 0.13
SMC6-210ENST00000621152 ARPC1AQ92747 370 aa15.88■□□□□ 0.13
SMC6-210ENST00000621152 DAPK2Q9UIK4 370 aa15.88■□□□□ 0.13
SMC6-210ENST00000621152 RRP15Q9Y3B9 282 aaKnown RBP15.88■□□□□ 0.13
SMC6-210ENST00000621152 LINC01619G3V211 115 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 J3QRK9 145 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 OVOL1O14753 267 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 IGLV2-23P01705 113 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 IGHV3-11P01762 117 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 LGALS1P09382 135 aaKnown RBP15.87■□□□□ 0.13
SMC6-210ENST00000621152 TAGLNQ01995 201 aaKnown RBP15.87■□□□□ 0.13
SMC6-210ENST00000621152 PJVKQ0ZLH3 352 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 H1FOOQ8IZA3 346 aaPredicted RBP15.87■□□□□ 0.13
SMC6-210ENST00000621152 OR5T1Q8NG75 326 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 DLX4Q92988 240 aaPredicted RBP15.87■□□□□ 0.13
SMC6-210ENST00000621152 C5orf30Q96GV9 206 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 OR51E2Q9H255 320 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 ZNF355PQ9NSJ1 428 aa15.87■□□□□ 0.13
SMC6-210ENST00000621152 SHOXO15266 292 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 CRYGBP07316 175 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 DTYMKP23919 212 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 INSL3P51460 131 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 SLURP1P55000 103 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 TPPP2P59282 170 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 CBX3Q13185 183 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 HACD4Q5VWC8 232 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 ZNF773Q6PK81 442 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 RHOVQ96L33 236 aa15.86■□□□□ 0.13
SMC6-210ENST00000621152 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMC6-210ENST00000621152 LSM4Q9Y4Z0 139 aaKnown RBP15.86■□□□□ 0.13
SMC6-210ENST00000621152 IGHV4OR15-8A0A075B7B6 117 aa15.85■□□□□ 0.13
SMC6-210ENST00000621152 A0A087WW49 117 aa15.85■□□□□ 0.13
SMC6-210ENST00000621152 SRRM4A7MD48 611 aaKnown RBP15.85■□□□□ 0.13
SMC6-210ENST00000621152 TRGV3P03979 118 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms