RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TMEM150CB9EJG8 249 aa8.81□□□□□ -1
VPS11-207ENST00000620429 PHF1O43189 567 aaPredicted RBP8.81□□□□□ -1
VPS11-207ENST00000620429 CA2P00918 260 aa8.81□□□□□ -1
VPS11-207ENST00000620429 CD38P28907 300 aa8.81□□□□□ -1
VPS11-207ENST00000620429 MUC21Q5SSG8 566 aa8.81□□□□□ -1
VPS11-207ENST00000620429 MRPL21Q7Z2W9 205 aaKnown RBP8.81□□□□□ -1
VPS11-207ENST00000620429 HAPLN4Q86UW8 402 aa8.81□□□□□ -1
VPS11-207ENST00000620429 SUMF1Q8NBK3 374 aa8.81□□□□□ -1
VPS11-207ENST00000620429 NEUROG1Q92886 237 aa8.81□□□□□ -1
VPS11-207ENST00000620429 SFRP2Q96HF1 295 aa8.81□□□□□ -1
VPS11-207ENST00000620429 TAAR6Q96RI8 345 aa8.81□□□□□ -1
VPS11-207ENST00000620429 KCNK17Q96T54 332 aa8.81□□□□□ -1
VPS11-207ENST00000620429 EMC6Q9BV81 110 aa8.81□□□□□ -1
VPS11-207ENST00000620429 RARRES3Q9UL19 164 aa8.81□□□□□ -1
VPS11-207ENST00000620429 B3GALT1Q9Y5Z6 326 aa8.81□□□□□ -1
VPS11-207ENST00000620429 VPS13AQ96RL7 3174 aa8.81□□□□□ -1
VPS11-207ENST00000620429 RAB29O14966 203 aa8.81□□□□□ -1
VPS11-207ENST00000620429 NUDT3O95989 172 aa8.81□□□□□ -1
VPS11-207ENST00000620429 LINC00869P0C866 280 aa8.81□□□□□ -1
VPS11-207ENST00000620429 SRD5A2P31213 254 aa8.81□□□□□ -1
VPS11-207ENST00000620429 DAP3P51398 398 aaKnown RBP8.81□□□□□ -1
VPS11-207ENST00000620429 ZNF83P51522 516 aa8.81□□□□□ -1
VPS11-207ENST00000620429 C17orf67Q0P5P2 114 aa8.81□□□□□ -1
VPS11-207ENST00000620429 CXorf66Q5JRM2 361 aaPredicted RBP8.81□□□□□ -1
VPS11-207ENST00000620429 CCDC71LQ8N9Z2 235 aa8.81□□□□□ -1
VPS11-207ENST00000620429 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.81□□□□□ -1
VPS11-207ENST00000620429 LIN37Q96GY3 246 aaPredicted RBP8.81□□□□□ -1
VPS11-207ENST00000620429 SLC39A9Q9NUM3 307 aa8.81□□□□□ -1
VPS11-207ENST00000620429 NECAP2Q9NVZ3 263 aa8.81□□□□□ -1
VPS11-207ENST00000620429 PCDH15Q96QU1 1955 aa8.8□□□□□ -1
VPS11-207ENST00000620429 DMDP11532 3685 aa8.8□□□□□ -1
VPS11-207ENST00000620429 A0A1W2PQD3 144 aa8.8□□□□□ -1
VPS11-207ENST00000620429 BLVRBP30043 206 aaPredicted RBP8.8□□□□□ -1
VPS11-207ENST00000620429 THBS3P49746 956 aa8.8□□□□□ -1
VPS11-207ENST00000620429 PAX9P55771 341 aa8.8□□□□□ -1
VPS11-207ENST00000620429 PSG4Q00888 419 aa8.8□□□□□ -1
VPS11-207ENST00000620429 SMAGPQ0VAQ4 97 aa8.8□□□□□ -1
VPS11-207ENST00000620429 PHLDA2Q53GA4 152 aa8.8□□□□□ -1
VPS11-207ENST00000620429 OR5A2Q8NGI9 324 aa8.8□□□□□ -1
VPS11-207ENST00000620429 CFAP54Q96N23 3096 aa8.8□□□□□ -1
VPS11-207ENST00000620429 ZNF205O95201 554 aa8.8□□□□□ -1
VPS11-207ENST00000620429 IGKV3-11P04433 115 aa8.8□□□□□ -1
VPS11-207ENST00000620429 CCNOP22674 350 aa8.8□□□□□ -1
VPS11-207ENST00000620429 CD27P26842 260 aa8.8□□□□□ -1
VPS11-207ENST00000620429 OR1D4P47884 311 aa8.8□□□□□ -1
VPS11-207ENST00000620429 TESK1Q15569 626 aa8.8□□□□□ -1
VPS11-207ENST00000620429 ATOH7Q8N100 152 aa8.8□□□□□ -1
VPS11-207ENST00000620429 FAM58AQ8N1B3 248 aa8.8□□□□□ -1
VPS11-207ENST00000620429 MTURNQ8N3F0 131 aa8.8□□□□□ -1
VPS11-207ENST00000620429 BORCS7Q96B45 105 aa8.8□□□□□ -1
VPS11-207ENST00000620429 NPVFQ9HCQ7 196 aa8.8□□□□□ -1
VPS11-207ENST00000620429 MCTS1Q9ULC4 181 aaKnown RBP8.8□□□□□ -1
VPS11-207ENST00000620429 ASXL3Q9C0F0 2248 aa8.79□□□□□ -1
VPS11-207ENST00000620429 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.79□□□□□ -1
VPS11-207ENST00000620429 PMCHP20382 165 aa8.79□□□□□ -1
VPS11-207ENST00000620429 GUCA1AP43080 201 aaPredicted RBP8.79□□□□□ -1
VPS11-207ENST00000620429 FASLGP48023 281 aa8.79□□□□□ -1
VPS11-207ENST00000620429 RRADP55042 308 aa8.79□□□□□ -1
VPS11-207ENST00000620429 H1FNTQ75WM6 255 aaPredicted RBP8.79□□□□□ -1
VPS11-207ENST00000620429 OR8I2Q8N0Y5 310 aa8.79□□□□□ -1
VPS11-207ENST00000620429 OR8B12Q8NGG6 310 aa8.79□□□□□ -1
VPS11-207ENST00000620429 OR10V1Q8NGI7 309 aa8.79□□□□□ -1
VPS11-207ENST00000620429 NUDT22Q9BRQ3 303 aa8.79□□□□□ -1
VPS11-207ENST00000620429 SFXN3Q9BWM7 321 aa8.79□□□□□ -1
VPS11-207ENST00000620429 CLEC7AQ9BXN2 247 aa8.79□□□□□ -1
VPS11-207ENST00000620429 WDR61Q9GZS3 305 aaKnown RBP8.79□□□□□ -1
VPS11-207ENST00000620429 TMEM222Q9H0R3 208 aa8.79□□□□□ -1
VPS11-207ENST00000620429 GTSF1LQ9H1H1 148 aa8.79□□□□□ -1
VPS11-207ENST00000620429 TAAR3PQ9P1P4 343 aa8.79□□□□□ -1
VPS11-207ENST00000620429 WDR87Q6ZQQ6 2873 aa8.79□□□□□ -1
VPS11-207ENST00000620429 C2orf72A6NCS6 295 aa8.79□□□□□ -1
VPS11-207ENST00000620429 VSTM5A8MXK1 200 aa8.79□□□□□ -1
VPS11-207ENST00000620429 FCN1O00602 326 aa8.79□□□□□ -1
VPS11-207ENST00000620429 CHST1O43916 411 aa8.79□□□□□ -1
VPS11-207ENST00000620429 CELA3BP08861 270 aa8.79□□□□□ -1
VPS11-207ENST00000620429 GLI4P10075 376 aa8.79□□□□□ -1
VPS11-207ENST00000620429 CLDN17P56750 224 aa8.79□□□□□ -1
VPS11-207ENST00000620429 RELBQ01201 579 aa8.79□□□□□ -1
VPS11-207ENST00000620429 SSC4DQ8WTU2 575 aa8.79□□□□□ -1
VPS11-207ENST00000620429 NINJ1Q92982 152 aa8.79□□□□□ -1
VPS11-207ENST00000620429 GNB1LQ9BYB4 327 aa8.79□□□□□ -1
VPS11-207ENST00000620429 ST20Q9HBF5 79 aa8.79□□□□□ -1
VPS11-207ENST00000620429 NXT1Q9UKK6 140 aaKnown RBP8.79□□□□□ -1
VPS11-207ENST00000620429 SPAG17Q6Q759 2223 aa8.79□□□□□ -1
VPS11-207ENST00000620429 CNTRLQ7Z7A1 2325 aa8.78□□□□□ -1
VPS11-207ENST00000620429 LAMTOR5O43504 91 aa8.78□□□□□ -1
VPS11-207ENST00000620429 OR1D5P58170 312 aa8.78□□□□□ -1
VPS11-207ENST00000620429 ZNF121P58317 390 aaPredicted RBP8.78□□□□□ -1
VPS11-207ENST00000620429 LRRC75BQ2VPJ9 315 aa8.78□□□□□ -1
VPS11-207ENST00000620429 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
VPS11-207ENST00000620429 SHISA2Q6UWI4 295 aa8.78□□□□□ -1
VPS11-207ENST00000620429 FAM57BQ71RH2 274 aa8.78□□□□□ -1
VPS11-207ENST00000620429 STRADBQ9C0K7 418 aa8.78□□□□□ -1
VPS11-207ENST00000620429 FRYLO94915 3013 aa8.78□□□□□ -1
VPS11-207ENST00000620429 C3orf85A0A1B0GTC6 90 aa8.78□□□□□ -1
VPS11-207ENST00000620429 MDFIC2A0A1B0GVS7 189 aa8.78□□□□□ -1
VPS11-207ENST00000620429 DEGS1O15121 323 aa8.78□□□□□ -1
VPS11-207ENST00000620429 MPPED1O15442 326 aa8.78□□□□□ -1
VPS11-207ENST00000620429 TSPAN13O95857 204 aa8.78□□□□□ -1
VPS11-207ENST00000620429 NPPCP23582 126 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms