RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	HLA-G	P17693	338 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	BID	P55957	195 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	GLO1	Q04760	184 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	TMEM69	Q5SWH9	247 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	SLC16A14	Q7RTX9	510 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	NKAIN3	Q8N8D7	197 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	TMEM229B	Q8NBD8	167 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	OR5T2	Q8NGG2	359 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	MRGPRD	Q8TDS7	321 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	SPTSSA	Q969W0	71 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	SEH1L	Q96EE3	360 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	VPS25	Q9BRG1	176 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	METTL8	Q9H825	291 aa	Known RBP	4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	MGA	Q8IWI9	3026 aa		4.38	□□□□□ -1.71
CBWD3-215	ENST00000619322	DNAH9	Q9NYC9	4486 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	C13orf42	A0A1B0GVH6	325 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	OR2AT4	A6NND4	320 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	ZNF878	C9JN71	531 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	SLC16A7	O60669	478 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	RAMP3	O60896	148 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	MPZL1	O95297	269 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	HIST1H2AB	P04908	130 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	RCC1	P18754	421 aa	Predicted RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	RPS27	P42677	84 aa	Known RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	NKX2-1	P43699	371 aa	Predicted RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	TNFAIP6	P98066	277 aa	Predicted RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	UNC119	Q13432	240 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	C2orf76	Q3KRA6	126 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	HIST3H2A	Q7L7L0	130 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	TCTEX1D1	Q8N7M0	179 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	SLC25A40	Q8TBP6	338 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	MITD1	Q8WV92	249 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	HIST1H2AC	Q93077	130 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	FAM3D	Q96BQ1	224 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	OR51I2	Q9H344	312 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	TCF7L1	Q9HCS4	588 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	DYNLRB1	Q9NP97	96 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	MED9	Q9NWA0	146 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	TAS2R8	Q9NYW2	309 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	SLC22A13	Q9Y226	551 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	NF1	P21359	2839 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	PRKDC	P78527	4128 aa	Known RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	TMEM14DP	A8MWL7	114 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	TSTD3	H0UI37	97 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	AP4M1	O00189	453 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	HOXA5	P20719	270 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	ZFP36	P26651	326 aa	Known RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	ZNF121	P58317	390 aa	Predicted RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	FMOD	Q06828	376 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	EIF2B1	Q14232	305 aa	Known RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	TMEM95	Q3KNT9	176 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	TDRG1	Q3Y452	100 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	ZNF260	Q3ZCT1	412 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	DMRTC1	Q5HYR2	192 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	KCTD18	Q6PI47	426 aa	Predicted RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	KCTD9	Q7L273	389 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	BPIFB2	Q8N4F0	458 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	OR4C16	Q8NGL9	310 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	ZNF671	Q8TAW3	534 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	NEK7	Q8TDX7	302 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	SEC61A2	Q9H9S3	476 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	RAB9B	Q9NP90	201 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	GAR1	Q9NY12	217 aa	Known RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	TP73-AS1	Q9UF72	201 aa		4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	RPUSD1	Q9UJJ7	312 aa	Known RBP	4.37	□□□□□ -1.71
CBWD3-215	ENST00000619322	CENPVL3	A0A0U1RRI6	287 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	HMSD	A8MTL9	139 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	HSPA12A	O43301	675 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	GMFG	O60234	142 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	FCN3	O75636	299 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	TRGC2	P03986	189 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	LCAT	P04180	440 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	ZNF32	P17041	273 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	HSD11B1	P28845	292 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	MYCNOS	P40205	109 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	ACSM6	Q6P461	480 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322		Q6ZS49	121 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	TMEM17	Q86X19	198 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	GAFA1	Q96PS6	74 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	TMEM100	Q9NV29	134 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	TAS2R4	Q9NYW5	299 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	PRRC2C	Q9Y520	2896 aa	Known RBP	4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	LOC107986453	A0A1B0GWG9	222 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	RFPL4A	A6NLU0	287 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	RFPL4AL1	F8VTS6	287 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	RAB27B	O00194	218 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	XKRY	O14609	159 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	RPP14	O95059	124 aa	Known RBP	4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	NXPH2	O95156	264 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	GLP1R	P43220	463 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	ATP1B3	P54709	279 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	RAB11B	Q15907	218 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	LRRC75B	Q2VPJ9	315 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	CEACAM21	Q3KPI0	293 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	OR5AS1	Q8N127	324 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	OR4D6	Q8NGJ1	314 aa		4.36	□□□□□ -1.71
CBWD3-215	ENST00000619322	OR51A2	Q8NGJ7	313 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms