RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 RAI1Q7Z5J4 1906 aaPredicted RBP15.71■□□□□ 0.11
PSPC1-206ENST00000619300 IGHV1-69-2A0A0G2JMI3 117 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 NUDT19A8MXV4 375 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 NFYBP25208 207 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 TAS2R30P59541 319 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 BLOC1S1P78537 153 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 MIDNQ504T8 468 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 STX12Q86Y82 276 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 TMEM217Q8N7C4 229 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 PSENENQ9NZ42 101 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 USF3Q68DE3 2245 aa15.71■□□□□ 0.11
PSPC1-206ENST00000619300 H3BP45 60 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 IAPPP10997 89 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 SULT1A1P50225 295 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 UBE2KP61086 200 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 RPL31P62899 125 aaKnown RBP15.7■□□□□ 0.1
PSPC1-206ENST00000619300 PXDC1Q5TGL8 231 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 H2BFWTQ7Z2G1 175 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 HSD17B11Q8NBQ5 300 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 A0A1W2PPE3 182 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 FCGR3BO75015 233 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 MMP23AO75900 390 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 LOXP28300 417 aaPredicted RBP15.7■□□□□ 0.1
PSPC1-206ENST00000619300 TNFRSF9Q07011 255 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 TFF3Q07654 80 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 TUSC1Q2TAM9 212 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 UQCC3Q6UW78 93 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 LYPD2Q6UXB3 125 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.7■□□□□ 0.1
PSPC1-206ENST00000619300 ZNF439Q8NDP4 499 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 TMEM204Q9BSN7 226 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 MMP26Q9NRE1 261 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 C19orf12Q9NSK7 152 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 HSPB7Q9UBY9 170 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 RPUSD1Q9UJJ7 312 aaKnown RBP15.7■□□□□ 0.1
PSPC1-206ENST00000619300 PKDREJQ9NTG1 2253 aa15.7■□□□□ 0.1
PSPC1-206ENST00000619300 NBASA2RRP1 2371 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 RBFOX2O43251 390 aaKnown RBP eCLIP15.69■□□□□ 0.1
PSPC1-206ENST00000619300 NDUFB3O43676 98 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 FCN3O75636 299 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 HPRT1P00492 218 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 DANCRP0C864 163 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 SMUG1Q53HV7 270 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 C1orf229Q6ZS94 237 aaPredicted RBP15.69■□□□□ 0.1
PSPC1-206ENST00000619300 SH3BGRL3Q9H299 93 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 HRH4Q9H3N8 390 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 PARP11Q9NR21 331 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 PRELID3BQ9Y3B1 194 aa15.69■□□□□ 0.1
PSPC1-206ENST00000619300 MARCH11A6NNE9 402 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 HFEQ30201 348 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 LRRC10Q5BKY1 277 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 PRAMEF5Q5TYX0 476 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 OR10A7Q8NGE5 316 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 R3HDM4Q96D70 268 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 GAL3ST2Q9H3Q3 398 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 RBKSQ9H477 322 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 KAAG1Q9UBP8 84 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 NDUFA2O43678 99 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 TMEM267Q0VDI3 215 aaPredicted RBP15.68■□□□□ 0.1
PSPC1-206ENST00000619300 ZNF273Q14593 569 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 TMEM200BQ69YZ2 307 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 IL34Q6ZMJ4 242 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 S1PR3Q99500 378 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 NARFLQ9H6Q4 476 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 SMG1Q96Q15 3661 aaKnown RBP15.68■□□□□ 0.1
PSPC1-206ENST00000619300 DSCAML1Q8TD84 2053 aa15.68■□□□□ 0.1
PSPC1-206ENST00000619300 SAA2-SAA4A0A096LPE2 208 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 SAA2P0DJI9 122 aaPredicted RBP15.67■□□□□ 0.1
PSPC1-206ENST00000619300 KIR2DS2P43631 304 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 RAB5CP51148 216 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 MRPS11P82912 194 aaKnown RBP15.67■□□□□ 0.1
PSPC1-206ENST00000619300 BTNL8Q6UX41 500 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 BPIFCQ8NFQ6 507 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 DDB2Q92466 427 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 ATP5SQ99766 215 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 ZNF251Q9BRH9 671 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 CACNA1AO00555 2505 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 ITPR1Q14643 2758 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 ANKHD1Q8IWZ3 2542 aaKnown RBP15.67■□□□□ 0.1
PSPC1-206ENST00000619300 PJVKQ0ZLH3 352 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 Q6ZRG5 221 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 LYG1Q8N1E2 194 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 STPG2Q8N412 459 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 CACFD1Q9UGQ2 172 aa15.67■□□□□ 0.1
PSPC1-206ENST00000619300 ARFGEF3Q5TH69 2177 aa15.66■□□□□ 0.1
PSPC1-206ENST00000619300 TMEM8BA6NDV4 472 aa15.66■□□□□ 0.1
PSPC1-206ENST00000619300 DVL1O14640 695 aa15.66■□□□□ 0.1
PSPC1-206ENST00000619300 DFFBO76075 338 aa15.66■□□□□ 0.1
PSPC1-206ENST00000619300 ATP6V0CP27449 155 aa15.66■□□□□ 0.1
PSPC1-206ENST00000619300 GNG10P50151 68 aa15.66■□□□□ 0.1
PSPC1-206ENST00000619300 SLC25A48Q6ZT89 311 aaKnown RBP15.66■□□□□ 0.1
PSPC1-206ENST00000619300 ZNF714Q96N38 554 aa15.66■□□□□ 0.1
PSPC1-206ENST00000619300 CTSZQ9UBR2 303 aa15.66■□□□□ 0.1
PSPC1-206ENST00000619300 COL6A6A6NMZ7 2263 aa15.65■□□□□ 0.1
PSPC1-206ENST00000619300 METTL15P1P0C7V9 234 aa15.65■□□□□ 0.1
PSPC1-206ENST00000619300 F2RL1P55085 397 aa15.65■□□□□ 0.1
PSPC1-206ENST00000619300 SPANXN5Q5MJ07 72 aa15.65■□□□□ 0.1
PSPC1-206ENST00000619300 HEPN1Q6WQI6 88 aa15.65■□□□□ 0.1
PSPC1-206ENST00000619300 LYPD6BQ8NI32 183 aa15.65■□□□□ 0.1
PSPC1-206ENST00000619300 H1FXQ92522 213 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms