RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 RNF224P0DH78 156 aa17.09■□□□□ 0.33
NEK3-208ENST00000618534 MEOX1P50221 254 aa17.09■□□□□ 0.33
NEK3-208ENST00000618534 CATR1Q13166 79 aa17.09■□□□□ 0.33
NEK3-208ENST00000618534 OR5T1Q8NG75 326 aa17.09■□□□□ 0.33
NEK3-208ENST00000618534 TMEM37Q8WXS4 190 aa17.09■□□□□ 0.33
NEK3-208ENST00000618534 ANAPC16Q96DE5 110 aa17.09■□□□□ 0.33
NEK3-208ENST00000618534 SPRY4Q9C004 299 aa17.09■□□□□ 0.33
NEK3-208ENST00000618534 C1QTNF9BB2RNN3 333 aa17.08■□□□□ 0.33
NEK3-208ENST00000618534 WNT9BO14905 357 aa17.08■□□□□ 0.33
NEK3-208ENST00000618534 HBZP02008 142 aa17.08■□□□□ 0.33
NEK3-208ENST00000618534 NPPCP23582 126 aa17.08■□□□□ 0.33
NEK3-208ENST00000618534 NUBP1P53384 320 aa17.08■□□□□ 0.33
NEK3-208ENST00000618534 ACTL10Q5JWF8 245 aa17.08■□□□□ 0.33
NEK3-208ENST00000618534 DCAF10Q5QP82 559 aa17.08■□□□□ 0.33
NEK3-208ENST00000618534 ZNF709Q8N972 641 aa17.08■□□□□ 0.33
NEK3-208ENST00000618534 MRPL37Q9BZE1 423 aaKnown RBP17.08■□□□□ 0.33
NEK3-208ENST00000618534 TRIOBPQ9H2D6 2365 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 MKRN2OSH3BPM6 223 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 GALR2O43603 387 aaPredicted RBP17.08■□□□□ 0.32
NEK3-208ENST00000618534 TFF1P04155 84 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 LINC00205P59089 165 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 AESQ08117 197 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 PRSS8Q16651 343 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 ZNF766Q5HY98 468 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 CXorf67Q86X51 503 aaPredicted RBP17.08■□□□□ 0.32
NEK3-208ENST00000618534 OR2T10Q8NGZ9 312 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 SLC25A40Q8TBP6 338 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 ZPBPQ9BS86 351 aa17.08■□□□□ 0.32
NEK3-208ENST00000618534 GGCTO75223 188 aaKnown RBP17.07■□□□□ 0.32
NEK3-208ENST00000618534 RBMXL2O75526 392 aaKnown RBP17.07■□□□□ 0.32
NEK3-208ENST00000618534 LPAL2Q16609 132 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 VWC2Q2TAL6 325 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 ACY3Q96HD9 319 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 MED13Q9UHV7 2174 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 C11orf94C9JXX5 98 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 CLDN14O95500 239 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 BMP5P22003 454 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 PDLIM4P50479 330 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 ZNF826PQ6ZT77 177 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 H2BFWTQ7Z2G1 175 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 ZNF664Q8N3J9 261 aa17.07■□□□□ 0.32
NEK3-208ENST00000618534 CHRNA7P36544 502 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 MRGPRDQ8TDS7 321 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 DEFB127Q9H1M4 99 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 OOEPA6NGQ2 149 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 RAB29O14966 203 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 EGR1P18146 543 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 CDC34P49427 236 aaPredicted RBP17.06■□□□□ 0.32
NEK3-208ENST00000618534 PSG7Q13046 419 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 UBALD2Q8IYN6 164 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 NINJ1Q92982 152 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 COQ2Q96H96 371 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 CIB3Q96Q77 187 aaPredicted RBP17.06■□□□□ 0.32
NEK3-208ENST00000618534 HES4Q9HCC6 221 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 OR6C3Q9NZP0 311 aa17.06■□□□□ 0.32
NEK3-208ENST00000618534 ZNF705GA8MUZ8 300 aaPredicted RBP17.05■□□□□ 0.32
NEK3-208ENST00000618534 LAMTOR5O43504 91 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 VENTXO95231 258 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 CRYAAP02489 173 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 SP1P08047 785 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 SRP14P37108 136 aaKnown RBP17.05■□□□□ 0.32
NEK3-208ENST00000618534 SSTP61278 116 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 Q6ZR03 302 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 CACNA1DQ01668 2161 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 LINC00473A8K010 186 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 A8MWP6 167 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 J3QW42 95 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 TYMSP04818 313 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 MPLP40238 635 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 GNB2P62879 340 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 MRPL49Q13405 166 aaKnown RBP17.05■□□□□ 0.32
NEK3-208ENST00000618534 GCSAMLQ5JQS6 135 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 SLC35E4Q6ICL7 350 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 FIP1L1Q6UN15 594 aaKnown RBP17.05■□□□□ 0.32
NEK3-208ENST00000618534 Q8N7P7 452 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 DDA1Q9BW61 102 aa17.05■□□□□ 0.32
NEK3-208ENST00000618534 AURKAIP1Q9NWT8 199 aaPredicted RBP17.05■□□□□ 0.32
NEK3-208ENST00000618534 WDFY4Q6ZS81 3184 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 IGHV3-43A0A0B4J1X8 118 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 IQCF6A8MYZ5 107 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 SLC31A2O15432 143 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 IGHV3-43DP0DP04 118 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 MPV17P39210 176 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 GABRA2P47869 451 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 SLC10A1Q14973 349 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 GABRA6Q16445 453 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 A0A1W2PNU3 283 aaPredicted RBP17.04■□□□□ 0.32
NEK3-208ENST00000618534 C17orf112F2Z3M2 114 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 NDUFB7P17568 137 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 SSTR5P35346 364 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 UBE2G2P60604 165 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 ACOT6Q3I5F7 207 aaPredicted RBP17.04■□□□□ 0.32
NEK3-208ENST00000618534 DMRTC2Q8IXT2 367 aaPredicted RBP17.04■□□□□ 0.32
NEK3-208ENST00000618534 CISD2Q8N5K1 135 aaKnown RBP17.04■□□□□ 0.32
NEK3-208ENST00000618534 TPRX1Q8N7U7 411 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 OBP2BQ9NPH6 170 aa17.04■□□□□ 0.32
NEK3-208ENST00000618534 TRAV38-1A0A0B4J264 116 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 C15orf62A8K5M9 175 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 MLNRO43193 412 aa17.03■□□□□ 0.32
NEK3-208ENST00000618534 GCGP01275 180 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms