RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CT45A3Q8NHU0 189 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 SAT2Q96F10 170 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 FAM212BQ9NTI7 297 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 IDI2-AS1Q9NZ38 188 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 ZNF729A6NN14 1252 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 TOR1AO14656 332 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 TXNL1O43396 289 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 SPP1P10451 314 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 BAXQ07812 192 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 PRAMEF5Q5TYX0 476 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 LYPD2Q6UXB3 125 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 C1orf229Q6ZS94 237 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 FAM216AQ8WUB2 273 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 CORO2AQ92828 525 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 LRRC46Q96FV0 321 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 HRH4Q9H3N8 390 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 C19orf12Q9NSK7 152 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 COA4Q9NYJ1 87 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 FCGR3BO75015 233 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 SCO1O75880 301 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 MIDNQ504T8 468 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 WSB1Q9Y6I7 421 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 hADV38S2A0JD32 116 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 ATG12O94817 140 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 SEC11BP0C7V7 166 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 ZNF273Q14593 569 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 TUSC1Q2TAM9 212 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 MUC15Q8N387 334 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 STPG2Q8N412 459 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 LINC00574Q9H8X3 128 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 PSENENQ9NZ42 101 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 RFNGQ9Y644 331 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 LINC00312Q9Y6C7 94 aa14.3□□□□□ -0.12
PCDHGC3-205ENST00000617641 ANKHD1Q8IWZ3 2542 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 YLPM1P49750 1951 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 IGHV1-69-2A0A0G2JMI3 117 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 KRBOX1C9JBD0 128 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 ITGB1BP1O14713 200 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 GNG10P50151 68 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 RAB7AP51149 207 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 ERVFRD-1P60508 538 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 RPL31P62899 125 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 TNFRSF9Q07011 255 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 ZNF266Q14584 549 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 ZNF672Q499Z4 452 aaPredicted RBP14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 H2BFWTQ7Z2G1 175 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 STX12Q86Y82 276 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 BPIFCQ8NFQ6 507 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 TNFRSF13BO14836 293 aaPredicted RBP14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 LOXP28300 417 aaPredicted RBP14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 UBE2KP61086 200 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 TFF3Q07654 80 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 Q6ZRG5 221 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 ZNF439Q8NDP4 499 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 CD300LFQ8TDQ1 290 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 R3HDM4Q96D70 268 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 RBKSQ9H477 322 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 MMP26Q9NRE1 261 aa14.29□□□□□ -0.12
PCDHGC3-205ENST00000617641 SAA2-SAA4A0A096LPE2 208 aa14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 RAB19A4D1S5 217 aa14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 MARCH11A6NNE9 402 aa14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 FAM90A26D6RGX4 464 aa14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 RAB29O14966 203 aa14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 SAA2P0DJI9 122 aaPredicted RBP14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 SULT1A1P50225 295 aa14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 CTSZQ9UBR2 303 aa14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 HSPB7Q9UBY9 170 aa14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 LAMP3Q9UQV4 416 aa14.28□□□□□ -0.12
PCDHGC3-205ENST00000617641 CACNA1AO00555 2505 aa14.27□□□□□ -0.12
PCDHGC3-205ENST00000617641 METTL15P1P0C7V9 234 aa14.27□□□□□ -0.12
PCDHGC3-205ENST00000617641 BLOC1S1P78537 153 aa14.27□□□□□ -0.12
PCDHGC3-205ENST00000617641 AKR1C1Q04828 323 aa14.27□□□□□ -0.12
PCDHGC3-205ENST00000617641 H1FXQ92522 213 aaKnown RBP14.27□□□□□ -0.12
PCDHGC3-205ENST00000617641 NARFLQ9H6Q4 476 aa14.27□□□□□ -0.12
PCDHGC3-205ENST00000617641 RPUSD1Q9UJJ7 312 aaKnown RBP14.27□□□□□ -0.12
PCDHGC3-205ENST00000617641 LYNX1G3V0Z9 82 aa14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 C1QL1O75973 258 aa14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 DANCRP0C864 163 aa14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 LYNX1P0DP58 116 aa14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 CCL3L1P16619 93 aa14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 ATP6V0CP27449 155 aa14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 FHITP49789 147 aa14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 SRSF3P84103 164 aaKnown RBP14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 LYG1Q8N1E2 194 aa14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 NARS2Q96I59 477 aaKnown RBP14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 ATP5SQ99766 215 aa14.27□□□□□ -0.13
PCDHGC3-205ENST00000617641 NDUFB3O43676 98 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 MEF2CQ06413 473 aaPredicted RBP14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 ARL16Q0P5N6 197 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 SPANXN5Q5MJ07 72 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 BTNL8Q6UX41 500 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 TMEM182Q6ZP80 229 aaPredicted RBP14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 ZNF251Q9BRH9 671 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 PARP11Q9NR21 331 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 ZNRD1Q9P1U0 126 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 GAB2Q9UQC2 676 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 DVL1O14640 695 aa14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 RBMXL2O75526 392 aaKnown RBP14.26□□□□□ -0.13
PCDHGC3-205ENST00000617641 HPRT1P00492 218 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms