RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CLN8Q9UBY8 286 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 FBXL17Q9UF56 701 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 M0R1X1 148 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 LGALS8O00214 317 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 FCGR3BO75015 233 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 PET100P0DJ07 73 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 CGB3P0DN86 165 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 CGB7P0DN87 165 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 TMEM200BQ69YZ2 307 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 THOC7Q6I9Y2 204 aaKnown RBP6.42□□□□□ -1.38
NEK3-207ENST00000617054 LYG1Q8N1E2 194 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 DIRC2Q96SL1 478 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 OR6C3Q9NZP0 311 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 TNCP24821 2201 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 KIAA1324LA8MWY0 1029 aaPredicted RBP6.42□□□□□ -1.38
NEK3-207ENST00000617054 ADH4P08319 380 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 LYL1P12980 280 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 REG1BP48304 166 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 HTD2P86397 168 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 CT83Q5H943 113 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 COMMD7Q86VX2 200 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 LINC00528Q8N1L1 170 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 SCARB1Q8WTV0 552 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 AKR1E2Q96JD6 320 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 AQP10Q96PS8 301 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 DOPEY1Q5JWR5 2465 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 RBMXL2O75526 392 aaKnown RBP6.41□□□□□ -1.38
NEK3-207ENST00000617054 DIAPH2-AS1Q14236 149 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 C1orf87Q8N0U7 546 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 LRRC46Q96FV0 321 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 IFI27L2Q9H2X8 130 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 LIN7CQ9NUP9 197 aaKnown RBP6.41□□□□□ -1.38
NEK3-207ENST00000617054 POMT1Q9Y6A1 747 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 PLXNB1O43157 2135 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 SAA2-SAA4A0A096LPE2 208 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 IGSF23A1L1A6 192 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 E5RGE8 158 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 SAA2P0DJI9 122 aaPredicted RBP6.41□□□□□ -1.38
NEK3-207ENST00000617054 TMEM267Q0VDI3 215 aaPredicted RBP6.41□□□□□ -1.38
NEK3-207ENST00000617054 EIF4EBP1Q13541 118 aaPredicted RBP6.41□□□□□ -1.38
NEK3-207ENST00000617054 EFNB3Q15768 340 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 ODF3L1Q8IXM7 274 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 IGFBPL1Q8WX77 278 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 UBTD1Q9HAC8 227 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 FBN2P35556 2912 aa6.41□□□□□ -1.38
NEK3-207ENST00000617054 NKX6-3A6NJ46 265 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 F2RL2O00254 374 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 NDUFB3O43676 98 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 B3GALNT1O75752 331 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 PAX6P26367 422 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.38
NEK3-207ENST00000617054 OR2B8PP59922 312 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 SRPXP78539 464 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 CLLU1Q5K131 121 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 BAP18Q8IXM2 172 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 HSD17B11Q8NBQ5 300 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 ABHD14AQ9BUJ0 271 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 SH3BGRL3Q9H299 93 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 GFOD1Q9NXC2 390 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 PLA2G2EQ9NZK7 142 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 TRAV3A0A0B4J244 114 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 YPEL1O60688 119 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 PAX9P55771 341 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 UBA52P62987 128 aaKnown RBP6.4□□□□□ -1.38
NEK3-207ENST00000617054 ID3Q02535 119 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 CR1LQ2VPA4 569 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 TOR2AQ5JU69 321 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 FAM209BQ5JX69 171 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 SSX8Q7RTT4 187 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 OR2C3Q8N628 320 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 YPEL2Q96QA6 119 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 JPT1Q9UK76 154 aa6.4□□□□□ -1.38
NEK3-207ENST00000617054 TNFRSF13BO14836 293 aaPredicted RBP6.4□□□□□ -1.39
NEK3-207ENST00000617054 TXNL1O43396 289 aa6.4□□□□□ -1.39
NEK3-207ENST00000617054 C1QL1O75973 258 aa6.4□□□□□ -1.39
NEK3-207ENST00000617054 FHITP49789 147 aa6.4□□□□□ -1.39
NEK3-207ENST00000617054 VAMP2P63027 116 aa6.4□□□□□ -1.39
NEK3-207ENST00000617054 EWSR1Q01844 656 aaKnown RBP eCLIP6.4□□□□□ -1.39
NEK3-207ENST00000617054 PAX5Q02548 391 aa6.4□□□□□ -1.39
NEK3-207ENST00000617054 AKR1C1Q04828 323 aa6.4□□□□□ -1.39
NEK3-207ENST00000617054 TMEM204Q9BSN7 226 aa6.4□□□□□ -1.39
NEK3-207ENST00000617054 IDI2-AS1Q9NZ38 188 aa6.4□□□□□ -1.39
NEK3-207ENST00000617054 A0A1B0GV50 99 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 hADV38S2A0JD32 116 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 PPIHO43447 177 aaKnown RBP6.39□□□□□ -1.39
NEK3-207ENST00000617054 PITX3O75364 302 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 TPT1P13693 172 aaKnown RBP6.39□□□□□ -1.39
NEK3-207ENST00000617054 MYOD1P15172 320 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 LRRC10Q5BKY1 277 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 PDZD9Q8IXQ8 264 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 EDARADDQ8WWZ3 215 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 MARCH11A6NNE9 402 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 I3L521 148 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 OPN1MWP04001 364 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 IGKV1-16P04430 117 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 METTL15P1P0C7V9 234 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 OPN1MW2P0DN77 364 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 OPN1MW3P0DN78 364 aa6.39□□□□□ -1.39
NEK3-207ENST00000617054 MRPS11P82912 194 aaKnown RBP6.39□□□□□ -1.39
NEK3-207ENST00000617054 SPANXN5Q5MJ07 72 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms