RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 LHX2P50458 406 aa13.07□□□□□ -0.32
GPN1-212ENST00000616939 Q0VG73 95 aa13.07□□□□□ -0.32
GPN1-212ENST00000616939 TOMM20LQ6UXN7 152 aa13.07□□□□□ -0.32
GPN1-212ENST00000616939 Q6ZWC4 215 aa13.07□□□□□ -0.32
GPN1-212ENST00000616939 OR1L1Q8NH94 360 aa13.07□□□□□ -0.32
GPN1-212ENST00000616939 WFIKKN1Q96NZ8 548 aa13.07□□□□□ -0.32
GPN1-212ENST00000616939 ZDHHC11Q9H8X9 412 aa13.07□□□□□ -0.32
GPN1-212ENST00000616939 TP53TG3Q9ULZ0 132 aa13.07□□□□□ -0.32
GPN1-212ENST00000616939 MRPS17Q9Y2R5 130 aaKnown RBP13.07□□□□□ -0.32
GPN1-212ENST00000616939 ZNF407Q9C0G0 2248 aa13.07□□□□□ -0.32
GPN1-212ENST00000616939 TRBV9A0A0B4J1U6 114 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 ZG16O60844 167 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 MMP23AO75900 390 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 OR2H2O95918 312 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 RFPL3SP0C7P2 107 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 KITLGP21583 273 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 ATP5G3P48201 142 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 AARDQ4LEZ3 155 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 OR10G8Q8NGN5 311 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 SDSLQ96GA7 329 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 TMEM204Q9BSN7 226 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 RTL8AQ9BWD3 113 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 IL36BQ9NZH7 164 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 POLDIP2Q9Y2S7 368 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 CABIN1Q9Y6J0 2220 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 NDUFB4O95168 129 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 NGFP01138 241 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 IRF2P14316 349 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 BRS3P32247 399 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 TIMP3P35625 211 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 LINC00310P59036 64 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 TLE1Q04724 770 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 PLP2Q04941 152 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 ZNF146Q15072 292 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 LPAR2Q9HBW0 351 aa13.06□□□□□ -0.32
GPN1-212ENST00000616939 GTF3C1Q12789 2109 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 FAM90A9PA6NNJ1 464 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 J3QW42 95 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 SIRPB1O00241 398 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 RBFOX2O43251 390 aaKnown RBP eCLIP13.05□□□□□ -0.32
GPN1-212ENST00000616939 GALR2O43603 387 aaPredicted RBP13.05□□□□□ -0.32
GPN1-212ENST00000616939 IL6RP08887 468 aaPredicted RBP13.05□□□□□ -0.32
GPN1-212ENST00000616939 RAC2P15153 192 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 G6PCP35575 357 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 OPRK1P41145 380 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 FOLR3P41439 243 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 ZNF114Q8NC26 417 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 OR5T1Q8NG75 326 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 C5orf30Q96GV9 206 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 PLA2G3Q9NZ20 509 aa13.05□□□□□ -0.32
GPN1-212ENST00000616939 A0A1B0GUS0 222 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 LNP1A1A4G5 178 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 ZNF503-AS2A6NEH8 195 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 C15orf62A8K5M9 175 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 RHBDL1O75783 438 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 S1PR2O95136 353 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 CRYAAP02489 173 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 STAG3L2P0CL84 134 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 STAG3L3P0CL85 134 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 CCL2P13500 99 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 PLA2G5P39877 138 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 WNT5AP41221 380 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 RPL30P62888 115 aaKnown RBP13.04□□□□□ -0.32
GPN1-212ENST00000616939 TRA2AQ13595 282 aaKnown RBP eCLIP13.04□□□□□ -0.32
GPN1-212ENST00000616939 IGFBP7Q16270 282 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 CST9LP1Q5W188 147 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 OR4B1Q8NGF8 309 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 C11orf52Q96A22 123 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 VAMP8Q9BV40 100 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 ZNF703Q9H7S9 590 aaPredicted RBP13.04□□□□□ -0.32
GPN1-212ENST00000616939 IL17BQ9UHF5 180 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 ARHGAP21Q5T5U3 1957 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 SAA2-SAA4A0A096LPE2 208 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 A0A096LPE4 126 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 TRAV39A0A0B4J263 110 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 A0A1W2PPZ6 126 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 TMEM30CPA0ZSE6 113 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 C9JCJ5 164 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 SH2D1BO14796 132 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 RAMP3O60896 148 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 TRAPPC6AO75865 159 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 IGHV3-9P01782 118 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 CRISP2P16562 243 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 GDF1P27539 372 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 MRPS11P82912 194 aaKnown RBP13.04□□□□□ -0.32
GPN1-212ENST00000616939 OR2J1Q9GZK6 312 aa13.04□□□□□ -0.32
GPN1-212ENST00000616939 REV3LO60673 3130 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 BRWD1Q9NSI6 2320 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 PTPRBP23467 1997 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 A0A1W2PPV4 95 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 CXorf1O96002 111 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 CD1BP29016 333 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 ZNF718Q3SXZ3 478 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 COX19Q49B96 90 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 TCF23Q7RTU1 214 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 H2BFWTQ7Z2G1 175 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 OR5AU1Q8NGC0 362 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 SAP25Q8TEE9 199 aa13.03□□□□□ -0.32
GPN1-212ENST00000616939 THOC3Q96J01 351 aaKnown RBP13.03□□□□□ -0.32
GPN1-212ENST00000616939 DERL1Q9BUN8 251 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms