RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 MFSD2BA6NFX1 497 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 MPC2O95563 127 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 B2MP61769 119 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 GVQW1Q8N7I0 195 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 WFIKKN1Q96NZ8 548 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 TMEM222Q9H0R3 208 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 LPAR5Q9H1C0 372 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 AKIRIN1Q9H9L7 192 aaPredicted RBP8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 TRAV8-7A0A075B6U6 113 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 A0A1W2PPE3 182 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 A6NNC1 897 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 P01737 135 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 SRD5A1P18405 259 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 DLX6P56179 175 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 RAB32Q13637 225 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 SPINK9Q5DT21 86 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 NUP210Q8TEM1 1887 aaPredicted RBP8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 ADAM10O14672 748 aa8.27□□□□□ -1.09
TNFRSF9-204ENST00000615230 THY1P04216 161 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 CD1BP29016 333 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 BAK1Q16611 211 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 Q6ZNX1 250 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 GBGT1Q8N5D6 347 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 MOB4Q9Y3A3 225 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 ELOA3CA0A087WX78 387 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 NPIPB6E9PJ23 425 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 KBTBD11O94819 623 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 PSG5Q15238 335 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 TMEM241Q24JQ0 296 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 C5orf17Q8NAS9 161 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 OR52B4Q8NGK2 314 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 C8orf46Q8TAG6 207 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 SLC25A15Q9Y619 301 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 C17orf51A8MQB3 221 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 TSTD3H0UI37 97 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 SLC25A17O43808 307 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 PGLYRP1O75594 196 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 SCGB1D1O95968 90 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 PGA5P0DJD9 388 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 VSIG10L2P0DP72 767 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 PRSS12P56730 875 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 NANOS3P60323 173 aaKnown RBP8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 HERVK_113P61574 105 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 PNRC1Q12796 327 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 C11orf91Q3C1V1 193 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 CTXND1A0A1B0GTU2 59 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 PQLC2LA1A4F0 135 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 PINLYPA6NC86 204 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 FAM78BQ5VT40 261 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 SSMEM1Q8WWF3 244 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 WDR89Q96FK6 387 aaPredicted RBP8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 SLIRPQ9GZT3 109 aaKnown RBP8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 TMEM133Q9H2Q1 129 aa8.26□□□□□ -1.09
TNFRSF9-204ENST00000615230 WISP1O95388 367 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 MMP7P09237 267 aaPredicted RBP8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 SSTP61278 116 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 DLK1P80370 383 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 SERF2P84101 59 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 PSG7Q13046 419 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 GTF3AQ92664 365 aaKnown RBP8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 IGKV1D-33P01593 117 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 IGKV1-33P01594 117 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 ZP3P21754 424 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 Q0VFX4 171 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 GGACTQ9BVM4 153 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 GSX2Q9BZM3 304 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 NXF2Q9GZY0 626 aaKnown RBP8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 TICRRQ7Z2Z1 1910 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 SPAG17Q6Q759 2223 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 NBR2O15453 112 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 KLF4O43474 513 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 FCER1GP30273 86 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 ZNF586Q9NXT0 402 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 NAT8Q9UHE5 227 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 CHD5Q8TDI0 1954 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 AP4M1O00189 453 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 GALNT14Q96FL9 552 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 MCRIP2Q9BUT9 160 aaKnown RBP8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 LEPP41159 167 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 POLR2GP62487 172 aaKnown RBP eCLIP8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 HLA-DRB5Q30154 266 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 GGNQ86UU5 652 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 SIGLECL1Q8N7X8 197 aa8.25□□□□□ -1.09
TNFRSF9-204ENST00000615230 GLIPR1P48060 266 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 RND3P61587 244 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 LINC01590Q5TEZ4 76 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 NOL4LQ96MY1 436 aaPredicted RBP8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 TSC2P49815 1807 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 YPEL1O60688 119 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 CRISP2P16562 243 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 EWSR1Q01844 656 aaKnown RBP eCLIP8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 SRSF7Q16629 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 YPEL2Q96QA6 119 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 URGCP-MRPS24S4R325 110 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 CCL1P22362 96 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 ZNF429Q86V71 674 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 TEX45Q8NA69 505 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 A0A0B4J293 547 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 FAM90A9PA6NNJ1 464 aa8.24□□□□□ -1.09
TNFRSF9-204ENST00000615230 B4DEV8 164 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms