RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 NDPQ00604 133 aa13.15□□□□□ -0.3
CBWD3-211ENST00000615061 LIN54Q6MZP7 749 aa13.15□□□□□ -0.3
CBWD3-211ENST00000615061 LCNL1Q6ZST4 164 aa13.15□□□□□ -0.3
CBWD3-211ENST00000615061 R3HDM4Q96D70 268 aa13.15□□□□□ -0.3
CBWD3-211ENST00000615061 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.31
CBWD3-211ENST00000615061 RPS16P62249 146 aaKnown RBP13.15□□□□□ -0.31
CBWD3-211ENST00000615061 PDPNQ86YL7 162 aa13.15□□□□□ -0.31
CBWD3-211ENST00000615061 SNX29P2Q8IUI4 249 aa13.15□□□□□ -0.31
CBWD3-211ENST00000615061 ZNF645Q8N7E2 425 aa13.15□□□□□ -0.31
CBWD3-211ENST00000615061 IFT46Q9NQC8 304 aa13.15□□□□□ -0.31
CBWD3-211ENST00000615061 TPSG1Q9NRR2 321 aa13.15□□□□□ -0.31
CBWD3-211ENST00000615061 TSSC4Q9Y5U2 329 aaPredicted RBP13.15□□□□□ -0.31
CBWD3-211ENST00000615061 ATP6V0E1O15342 81 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 RBBP9O75884 186 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 AADACP22760 399 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 FCGR2CP31995 323 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 CBX5P45973 191 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 PSG5Q15238 335 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 C18orf65Q6ZTR6 163 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 BVESQ8NE79 360 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 FLYWCH2Q96CP2 140 aaKnown RBP13.14□□□□□ -0.31
CBWD3-211ENST00000615061 CMTM3Q96MX0 182 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 CLCC1Q96S66 551 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 GPHA2Q96T91 129 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 PARP11Q9NR21 331 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 FBXO7Q9Y3I1 522 aa13.14□□□□□ -0.31
CBWD3-211ENST00000615061 G3V318 75 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 IGF1P05019 195 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 OR5H8P0DN80 308 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 PRSS3P35030 304 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 RFX2P48378 723 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 THBS3P49746 956 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 PLGLAQ15195 96 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 MZT2AQ6P582 158 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 OR5AP2Q8NGF4 316 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 RAB2BQ8WUD1 216 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 DDB2Q92466 427 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 AP3S1Q92572 193 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 OR51J1Q9H342 316 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 NECAP2Q9NVZ3 263 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 METTL1Q9UBP6 276 aaKnown RBP13.13□□□□□ -0.31
CBWD3-211ENST00000615061 ANAPC10Q9UM13 185 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 WSB1Q9Y6I7 421 aa13.13□□□□□ -0.31
CBWD3-211ENST00000615061 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 FAM25AB3EWG3 89 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 FAM25CB3EWG5 89 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 FAM25GB3EWG6 89 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 SLC25A17O43808 307 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 OPN1MWP04001 364 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 OPN1MW2P0DN77 364 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 OPN1MW3P0DN78 364 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 SLC35B1P78383 322 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 CFHR3Q02985 330 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 RNF5Q99942 180 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 RBMX2Q9Y388 322 aaKnown RBP13.12□□□□□ -0.31
CBWD3-211ENST00000615061 SRRM4A7MD48 611 aaKnown RBP13.12□□□□□ -0.31
CBWD3-211ENST00000615061 IGLV2-23P01705 113 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 TMBIM6P55061 237 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 RPL30P62888 115 aaKnown RBP13.12□□□□□ -0.31
CBWD3-211ENST00000615061 CX3CL1P78423 397 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 GPX8Q8TED1 209 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 SECTM1Q8WVN6 248 aa13.12□□□□□ -0.31
CBWD3-211ENST00000615061 CTDSP2O14595 271 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 PPYP01298 95 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 PMP2P02689 132 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
CBWD3-211ENST00000615061 VDAC1P21796 283 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 FXYD4P59646 89 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 CDK10Q15131 360 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 RNASE12Q5GAN4 147 aaKnown RBP13.11□□□□□ -0.31
CBWD3-211ENST00000615061 OR2B11Q5JQS5 317 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 TEX38Q6PEX7 206 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 OR4F17Q8NGA8 305 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 HARBI1Q96MB7 349 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 TSNAXQ99598 290 aaKnown RBP13.11□□□□□ -0.31
CBWD3-211ENST00000615061 FAM103A1Q9BTL3 118 aaKnown RBP13.11□□□□□ -0.31
CBWD3-211ENST00000615061 MIXL1Q9H2W2 232 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 CCL28Q9NRJ3 127 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 TAS2R8Q9NYW2 309 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 EXTL2Q9UBQ6 330 aa13.11□□□□□ -0.31
CBWD3-211ENST00000615061 PRKDCP78527 4128 aaKnown RBP13.11□□□□□ -0.31
CBWD3-211ENST00000615061 H3BMQ9 156 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 CRYZL1O95825 349 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 CA2P00918 260 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 HLA-DMAP28067 261 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 RPL23AP62750 156 aaKnown RBP13.1□□□□□ -0.31
CBWD3-211ENST00000615061 PJVKQ0ZLH3 352 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 RTL8BQ17RB0 113 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 TMEM177Q53S58 311 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 KCTD9Q7L273 389 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 LYSMD2Q8IV50 215 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 DYNC2LI1Q8TCX1 351 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 ISOC1Q96CN7 298 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 EHFQ9NZC4 300 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 SCOCQ9UIL1 159 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 A3GALT2U3KPV4 340 aa13.1□□□□□ -0.31
CBWD3-211ENST00000615061 SHOXO15266 292 aa13.09□□□□□ -0.31
CBWD3-211ENST00000615061 TNFSF12O43508 249 aa13.09□□□□□ -0.31
CBWD3-211ENST00000615061 FCGR3BO75015 233 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms