RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 OR10J5Q8NHC4 309 aa13.47□□□□□ -0.25
PRKN-209ENST00000612485 FLYWCH2Q96CP2 140 aaKnown RBP13.47□□□□□ -0.25
PRKN-209ENST00000612485 CABLES2Q9BTV7 478 aa13.47□□□□□ -0.25
PRKN-209ENST00000612485 GAB2Q9UQC2 676 aa13.47□□□□□ -0.25
PRKN-209ENST00000612485 SHISA3A0PJX4 238 aa13.46□□□□□ -0.25
PRKN-209ENST00000612485 MFNGO00587 321 aa13.46□□□□□ -0.25
PRKN-209ENST00000612485 BET1O15155 118 aa13.46□□□□□ -0.25
PRKN-209ENST00000612485 CA2P00918 260 aa13.46□□□□□ -0.25
PRKN-209ENST00000612485 EGR2P11161 476 aaPredicted RBP13.46□□□□□ -0.25
PRKN-209ENST00000612485 HIST1H1DP16402 221 aaKnown RBP13.46□□□□□ -0.25
PRKN-209ENST00000612485 GNB3P16520 340 aa13.46□□□□□ -0.25
PRKN-209ENST00000612485 UNQ5815/PRO19632Q6UWF5 114 aa13.46□□□□□ -0.25
PRKN-209ENST00000612485 PRR25Q96S07 402 aa13.46□□□□□ -0.25
PRKN-209ENST00000612485 FAM103A1Q9BTL3 118 aaKnown RBP13.46□□□□□ -0.25
PRKN-209ENST00000612485 CENPOQ9BU64 300 aa13.46□□□□□ -0.25
PRKN-209ENST00000612485 SLC35D1Q9NTN3 355 aa13.46□□□□□ -0.25
PRKN-209ENST00000612485 COL7A1Q02388 2944 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 A0A075B6Q4 140 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 TRBV6-7A0A0A0MS04 114 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 LINC01619G3V211 115 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 RAB27BO00194 218 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 OVOL1O14753 267 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 LGALS1P09382 135 aaKnown RBP13.45□□□□□ -0.26
PRKN-209ENST00000612485 OR8U9P0C7N5 309 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 GSTT2P0CG29 244 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 GSTT2BP0CG30 244 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 TALDO1P37837 337 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 LINC00205P59089 165 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 CBX3Q13185 183 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 ARL6IP1Q15041 203 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 IGSF11Q5DX21 431 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 C22orf42Q6IC83 251 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 ZNF429Q86V71 674 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 LFNGQ8NES3 379 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 DCUN1D4Q92564 292 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 ARPC1AQ92747 370 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 YTHDF1Q9BYJ9 559 aaKnown RBP13.45□□□□□ -0.26
PRKN-209ENST00000612485 OR2D2Q9H210 308 aa13.45□□□□□ -0.26
PRKN-209ENST00000612485 ZNF256Q9Y2P7 627 aaPredicted RBP13.45□□□□□ -0.26
PRKN-209ENST00000612485 LSM4Q9Y4Z0 139 aaKnown RBP13.45□□□□□ -0.26
PRKN-209ENST00000612485 SLC25A17O43808 307 aa13.44□□□□□ -0.26
PRKN-209ENST00000612485 NHLRC4P0CG21 123 aaPredicted RBP13.44□□□□□ -0.26
PRKN-209ENST00000612485 LGALS7P47929 136 aa13.44□□□□□ -0.26
PRKN-209ENST00000612485 TAGLNQ01995 201 aaKnown RBP13.44□□□□□ -0.26
PRKN-209ENST00000612485 ARFRP1Q13795 201 aa13.44□□□□□ -0.26
PRKN-209ENST00000612485 SRSF7Q16629 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRKN-209ENST00000612485 UBE2UQ5VVX9 321 aa13.44□□□□□ -0.26
PRKN-209ENST00000612485 CASTOR1Q8WTX7 329 aa13.44□□□□□ -0.26
PRKN-209ENST00000612485 GINS4Q9BRT9 223 aa13.44□□□□□ -0.26
PRKN-209ENST00000612485 ALX4Q9H161 411 aaPredicted RBP13.44□□□□□ -0.26
PRKN-209ENST00000612485 SLA2Q9H6Q3 261 aa13.44□□□□□ -0.26
PRKN-209ENST00000612485 SDHAF2Q9NX18 166 aa13.44□□□□□ -0.26
PRKN-209ENST00000612485 RBM7Q9Y580 266 aaKnown RBP13.44□□□□□ -0.26
PRKN-209ENST00000612485 A0A0B4J203 849 aa13.43□□□□□ -0.26
PRKN-209ENST00000612485 TPPP2P59282 170 aa13.43□□□□□ -0.26
PRKN-209ENST00000612485 FXYD3Q14802 87 aa13.43□□□□□ -0.26
PRKN-209ENST00000612485 Q6ZS49 121 aa13.43□□□□□ -0.26
PRKN-209ENST00000612485 SPARTQ8N0X7 666 aa13.43□□□□□ -0.26
PRKN-209ENST00000612485 MAFIPQ8WZ33 124 aa13.43□□□□□ -0.26
PRKN-209ENST00000612485 ATG5Q9H1Y0 275 aa13.43□□□□□ -0.26
PRKN-209ENST00000612485 ZNF230Q9UIE0 474 aaPredicted RBP13.43□□□□□ -0.26
PRKN-209ENST00000612485 CNIH1O95406 144 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 LY86O95711 162 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 RRASP10301 218 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 PSMB9P28065 219 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 SLURP1P55000 103 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 RTL8BQ17RB0 113 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 GRPEL2Q8TAA5 225 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 FCGR1BQ92637 280 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 DLX4Q92988 240 aaPredicted RBP13.42□□□□□ -0.26
PRKN-209ENST00000612485 HARBI1Q96MB7 349 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 MS4A10Q96PG2 267 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRKN-209ENST00000612485 TPSG1Q9NRR2 321 aa13.42□□□□□ -0.26
PRKN-209ENST00000612485 IGHV4OR15-8A0A075B7B6 117 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 A0A087WW49 117 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 NOTOA8MTQ0 251 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 H3BUA1 57 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 ARPC1BO15143 372 aaKnown RBP13.41□□□□□ -0.26
PRKN-209ENST00000612485 SAP30O75446 220 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 IGLV2-23P01705 113 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 IGHV3-11P01762 117 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 TRGV3P03979 118 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 HSPB1P04792 205 aaKnown RBP13.41□□□□□ -0.26
PRKN-209ENST00000612485 DTYMKP23919 212 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 FGF9P31371 208 aaPredicted RBP13.41□□□□□ -0.26
PRKN-209ENST00000612485 NR2C2APQ86WQ0 139 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 ADTRPQ96IZ2 230 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 RHOVQ96L33 236 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 TMEM68Q96MH6 324 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 WWC2-AS2Q96NR7 200 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 ZNF355PQ9NSJ1 428 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 TXNL4BQ9NX01 149 aaKnown RBP13.41□□□□□ -0.26
PRKN-209ENST00000612485 STUB1Q9UNE7 303 aa13.41□□□□□ -0.26
PRKN-209ENST00000612485 SHOXO15266 292 aa13.4□□□□□ -0.26
PRKN-209ENST00000612485 CRYGBP07316 175 aa13.4□□□□□ -0.26
PRKN-209ENST00000612485 SNRPBP14678 240 aaKnown RBP13.4□□□□□ -0.26
PRKN-209ENST00000612485 TMEM177Q53S58 311 aa13.4□□□□□ -0.26
PRKN-209ENST00000612485 ZNF773Q6PK81 442 aa13.4□□□□□ -0.26
PRKN-209ENST00000612485 TPRA1Q86W33 373 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms